Genomic Bayesian confirmatory factor analysis and Bayesian network to characterize a wide spectrum of rice phenotypes
With the advent of high-throughput phenotyping platforms, plant breeders have a means to
assess many traits for large breeding populations. However, understanding the genetic …
assess many traits for large breeding populations. However, understanding the genetic …
Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding
It is hypothesized that the genome-wide genic markers may increase the prediction accuracy
of genomic selection for quantitative traits. To test this hypothesis, a set of candidate gene …
of genomic selection for quantitative traits. To test this hypothesis, a set of candidate gene …
Analysis of trait heritability in functionally partitioned rice genomes
Abstract Knowledge of the genetic architecture of importantly agronomical traits can speed
up genetic improvement in cultivated rice (Oryza sativa L.). Many recent investigations have …
up genetic improvement in cultivated rice (Oryza sativa L.). Many recent investigations have …
[HTML][HTML] Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies
Background Plant breeders seek to develop cultivars with maximal agronomic value, which
is often assessed using numerous, often genetically correlated traits. As intervention on one …
is often assessed using numerous, often genetically correlated traits. As intervention on one …
[HTML][HTML] Genome-wide association study and Mendelian randomization analysis provide insights for improving rice yield potential
J Su, K Xu, Z Li, Y Hu, Z Hu, X Zheng, S Song… - Scientific Reports, 2021 - nature.com
Rice yield per plant has a complex genetic architecture, which is mainly determined by its
three component traits: the number of grains per panicle (GPP), kilo-grain weight (KGW) …
three component traits: the number of grains per panicle (GPP), kilo-grain weight (KGW) …
[HTML][HTML] Multi-locus genome-wide association studies for five yield-related traits in rice
Background Improving the overall production of rice with high quality is a major target of
breeders. Mining potential yield-related loci have been geared towards developing efficient …
breeders. Mining potential yield-related loci have been geared towards developing efficient …
[HTML][HTML] Genetic variation and association mapping for 12 agronomic traits in indica rice
Q Lu, M Zhang, X Niu, S Wang, Q Xu, Y Feng, C Wang… - BMC genomics, 2015 - Springer
Abstract Background Increasing rice (Oryza sativa L.) yield is a crucial challenge for modern
agriculture. The ideal plant architecture is considered to be critical to enhance rice yield …
agriculture. The ideal plant architecture is considered to be critical to enhance rice yield …
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor‐made rice with enhanced …
Though several genes governing various major traits have been reported in rice, their
superior haplotype combinations for developing ideal variety remains elusive. In this study …
superior haplotype combinations for developing ideal variety remains elusive. In this study …
[HTML][HTML] Genome-wide association study reveals novel genomic regions governing agronomic and grain quality traits and superior allelic combinations for Basmati …
KP Abhijith, S Gopala Krishnan, KT Ravikiran… - Frontiers in Plant …, 2022 - frontiersin.org
Background Basmati is a speciality segment in the rice genepool characterised by explicit
grain quality. For the want of suitable populations, genome-wide association study (GWAS) …
grain quality. For the want of suitable populations, genome-wide association study (GWAS) …
[PDF][PDF] Genome-wide association studies in rice: how to solve the low power problems?
X Zhou, X Huang - Molecular plant, 2019 - cell.com
In human genetics, genome-wide association study (GWAS) is a commonly used method for
discovering genes and genetic variants contributing to human traits, usually through …
discovering genes and genetic variants contributing to human traits, usually through …