AssignFit: a program for simultaneous assignment and structure refinement from solid-state NMR spectra
Y Tian, CD Schwieters, SJ Opella… - Journal of Magnetic …, 2012 - Elsevier
AssignFit is a computer program developed within the XPLOR-NIH package for the
assignment of dipolar coupling (DC) and chemical shift anisotropy (CSA) restraints derived …
assignment of dipolar coupling (DC) and chemical shift anisotropy (CSA) restraints derived …
15N chemical shift anisotropy in protein structure refinement and comparison with NH residual dipolar couplings
RS Lipsitz, N Tjandra - Journal of Magnetic Resonance, 2003 - Elsevier
Recent methods of aligning proteins which were developed in order to measure residual
dipolar couplings (RDCs) in solution can also be used for additional applications such as …
dipolar couplings (RDCs) in solution can also be used for additional applications such as …
Atomic refinement with correlated solid-state NMR restraints
R Bertram, T Asbury, F Fabiola, JR Quine… - Journal of Magnetic …, 2003 - Elsevier
The orientation data provided by solid-state NMR can provide a great deal of structural
information about membrane proteins. The quality of the information provided is, however …
information about membrane proteins. The quality of the information provided is, however …
Top-down approach in protein RDC data analysis: de novo estimation of the alignment tensor
In solution NMR spectroscopy the residual dipolar coupling (RDC) is invaluable in improving
both the precision and accuracy of NMR structures during their structural refinement. The …
both the precision and accuracy of NMR structures during their structural refinement. The …
Membrane Protein Structure Determination in Membrana
Y Ding, Y Yao, FM Marassi - Accounts of chemical research, 2013 - ACS Publications
The two principal components of biological membranes, the lipid bilayer and the proteins
integrated within it, have coevolved for specific functions that mediate the interactions of …
integrated within it, have coevolved for specific functions that mediate the interactions of …
A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints
To fully describe the fold space and ultimately the biological function of membrane proteins,
it is necessary to determine the specific interactions of the protein with the membrane. This …
it is necessary to determine the specific interactions of the protein with the membrane. This …
Protein structure determination using molecular fragment replacement and NMR dipolar couplings
F Delaglio, G Kontaxis, A Bax - Journal of the American Chemical …, 2000 - ACS Publications
Determination of the three-dimensional (3D) structure of a protein in solution from NMR data
has relied primarily on the measurement of a large number of interproton distances (NOEs) …
has relied primarily on the measurement of a large number of interproton distances (NOEs) …
Structure determination in “shiftless” solid state NMR of oriented protein samples
Y Yin, AA Nevzorov - Journal of Magnetic Resonance, 2011 - Elsevier
An efficient formalism for calculating protein structures from oriented-sample NMR data in
the torsion-angle space is presented. Angular anisotropies of the NMR observables are …
the torsion-angle space is presented. Angular anisotropies of the NMR observables are …
Complete Cross-Validation and R-Factor Calculation of a Solid-State NMR Derived Structure
Cross-validation of a solid-state NMR-derived membrane polypeptide structure is
demonstrated. An initial structure has been achieved directly from solid-state NMR derived …
demonstrated. An initial structure has been achieved directly from solid-state NMR derived …
Stereospecific assignments of protein NMR resonances based on the tertiary structure and 2D/3D NOE data
P Pristovšek, L Franzoni - Journal of computational chemistry, 2006 - Wiley Online Library
In many cases of protein structure determination by NMR a high‐quality structure is required.
An important contribution to structural precision is stereospecific assignment of magnetically …
An important contribution to structural precision is stereospecific assignment of magnetically …
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