Changes at the floor of the peptide‐binding groove induce a strong preference for Proline at position 3 of the bound peptide: Molecular dynamics simulations of HLA …
H Toh, CJ Savoie, N Kamikawaji, S Muta… - Biopolymers …, 2000 - Wiley Online Library
We report on molecular dynamics simulations of major histocompatibility complex (MHC)–
peptide complexes. Class I MHC molecules play an important role in cellular immunity by …
peptide complexes. Class I MHC molecules play an important role in cellular immunity by …
Automatic Sequence Design of Major Histocompatibility Complex Class I Binding Peptides Impairing CD8+ T Cell Recognition* 210
K Ogata, A Jaramillo, W Cohen, JP Briand… - Journal of Biological …, 2003 - ASBMB
An automatic protein design procedure was used to compute amino acid sequences of
peptides likely to bind the HLA-A2 major histocompatibility complex (MHC) class I allele. The …
peptides likely to bind the HLA-A2 major histocompatibility complex (MHC) class I allele. The …
Possible conformation of major histocompatibility antigens: implication of amino acid sequence data
VP Zav'yalov - Immunology Letters, 1981 - Elsevier
Possible conformation of major histocompatibility antigens was proposed on the basis of
homology between domains of major histocompatibility antigen polypeptide chains and …
homology between domains of major histocompatibility antigen polypeptide chains and …
The Conformational Flexibility and β2-Microglobulin Interaction Dynamics of the H-2Kb Heavy Chain
BH Barber, MH Smith, H Allen, DB Williams - MHC+ X: complex formation …, 1988 - Springer
The expressed gene products of the class I major histocompatibility complex (MHC) are now
recognized as key elements in the mechanism used by cytotoxic T-lymphocytes (CTLs) to …
recognized as key elements in the mechanism used by cytotoxic T-lymphocytes (CTLs) to …
A recombinant single‐chain human class II MHC molecule (HLA‐DR1) as a covalently linked heterotrimer of α chain, β chain, and antigenic peptide, with …
X Zhu, S Bavari, R Ulrich… - European journal of …, 1997 - Wiley Online Library
Major histocompatibility complex (MHC) class II molecules bind to numerous peptides and
display these on the cell surface for T cell recognition. In a given immune response …
display these on the cell surface for T cell recognition. In a given immune response …
Peptide-binding motif prediction by using phage display library for SasaUBA* 0301, a resistance haplotype of MHC class I molecule from Atlantic Salmon (Salmo salar …
H Zhao, T Hermsen, RJM Stet, K Skjødt… - Molecular …, 2008 - Elsevier
The structure of the peptide-binding specificity of major histocompatibility complex (MHC)
class I has been analyzed extensively in human and mouse. For fish, there are no …
class I has been analyzed extensively in human and mouse. For fish, there are no …
Computational determination of side chain specificity for pockets in class I MHC molecules
G Vasmatzis, C Zhang, JL Cornette, C DeLisi - Molecular immunology, 1996 - Elsevier
We show that a rapidly executable computational procedure provides the basis for a
predictive understanding of antigenic peptide side chain specificity, for binding to class I …
predictive understanding of antigenic peptide side chain specificity, for binding to class I …
Solution binding of an antigenic peptide to a major histocompatibility complex class I molecule and the role of beta 2-microglobulin.
LF Boyd, S Kozlowski… - Proceedings of the …, 1992 - National Acad Sciences
The major histocompatibility complex-encoded class I molecule, a noncovalent dimer of a
polymorphic 45-kDa heavy chain and a nonpolymorphic 12-kDa beta 2-microglobulin (beta …
polymorphic 45-kDa heavy chain and a nonpolymorphic 12-kDa beta 2-microglobulin (beta …
Prediction of major histocompatibility complex binding regions of protein antigens by sequence pattern analysis.
We have previously experimentally analyzed the structural requirements for interaction
between peptide antigens and mouse major histocompatibility complex (MHC) molecules of …
between peptide antigens and mouse major histocompatibility complex (MHC) molecules of …
Conformational changes in mouse MHC class II proteins at acidic pH
MHC class II molecules bind peptide antigens and present them to T cells. Recent evidence
suggests that peptide-MHC class II interaction is regulated by pH. Both peptide binding to …
suggests that peptide-MHC class II interaction is regulated by pH. Both peptide binding to …