Graph convolutional neural networks for predicting drug-target interactions
Accurate determination of target-ligand interactions is crucial in the drug discovery process.
In this paper, we propose a graph-convolutional (Graph-CNN) framework for predicting …
In this paper, we propose a graph-convolutional (Graph-CNN) framework for predicting …
Modality-DTA: multimodality fusion strategy for drug–target affinity prediction
Prediction of the drug–target affinity (DTA) plays an important role in drug discovery. Existing
deep learning methods for DTA prediction typically leverage a single modality, namely …
deep learning methods for DTA prediction typically leverage a single modality, namely …
SS-GNN: a simple-structured graph neural network for affinity prediction
S Zhang, Y Jin, T Liu, Q Wang, Z Zhang, S Zhao… - ACS …, 2023 - ACS Publications
Efficient and effective drug-target binding affinity (DTBA) prediction is a challenging task due
to the limited computational resources in practical applications and is a crucial basis for drug …
to the limited computational resources in practical applications and is a crucial basis for drug …
NHGNN-DTA: a node-adaptive hybrid graph neural network for interpretable drug–target binding affinity prediction
H He, G Chen, CYC Chen - Bioinformatics, 2023 - academic.oup.com
Motivation Large-scale prediction of drug–target affinity (DTA) plays an important role in
drug discovery. In recent years, machine learning algorithms have made great progress in …
drug discovery. In recent years, machine learning algorithms have made great progress in …
How to approach machine learning-based prediction of drug/compound–target interactions
H Atas Guvenilir, T Doğan - Journal of Cheminformatics, 2023 - Springer
The identification of drug/compound–target interactions (DTIs) constitutes the basis of drug
discovery, for which computational predictive approaches have been developed. As a …
discovery, for which computational predictive approaches have been developed. As a …
MGPLI: exploring multigranular representations for protein–ligand interaction prediction
Motivation The capability to predict the potential drug binding affinity against a protein target
has always been a fundamental challenge in silico drug discovery. The traditional …
has always been a fundamental challenge in silico drug discovery. The traditional …
Prediction of drug-target interactions and drug repositioning via network-based inference
Drug-target interaction (DTI) is the basis of drug discovery and design. It is time consuming
and costly to determine DTI experimentally. Hence, it is necessary to develop computational …
and costly to determine DTI experimentally. Hence, it is necessary to develop computational …
Graph convolutional autoencoder and generative adversarial network-based method for predicting drug-target interactions
The computational prediction of novel drug-target interactions (DTIs) may effectively speed
up the process of drug repositioning and reduce its costs. Most previous methods integrated …
up the process of drug repositioning and reduce its costs. Most previous methods integrated …
GraphscoreDTA: optimized graph neural network for protein–ligand binding affinity prediction
Motivation Computational approaches for identifying the protein–ligand binding affinity can
greatly facilitate drug discovery and development. At present, many deep learning-based …
greatly facilitate drug discovery and development. At present, many deep learning-based …
DLSSAffinity: protein–ligand binding affinity prediction via a deep learning model
H Wang, H Liu, S Ning, C Zeng, Y Zhao - Physical Chemistry Chemical …, 2022 - pubs.rsc.org
Evaluating the protein–ligand binding affinity is a substantial part of the computer-aided drug
discovery process. Most of the proposed computational methods predict protein–ligand …
discovery process. Most of the proposed computational methods predict protein–ligand …