Genome-wide association study reveals candidate genes related to low temperature tolerance in rice (Oryza sativa) during germination

H Wang, AR Lee, SY Park, SH Jin, J Lee, TH Ham… - 3 Biotech, 2018 - Springer
In this study, relative germination percentage (RGP) and delayed mean germination time
(DMGT) were measured in various rice accessions at the germination stage and carried out …

Comparative transcriptomics and co-expression networks reveal cultivar-specific molecular signatures associated with reproductive-stage cold stress in rice

Y Niu, S Fan, B Cheng, H Li, J Wu, H Zhao, Z Huang… - Plant Cell Reports, 2023 - Springer
Key message The resistance of Huaidao5 results from the high constitutive expression of
tolerance genes, while that of Huaidao9 is due to the cold-induced resistance in flag leaves …

An R2R3-Type Transcription Factor OsMYBAS1 Regulates Seed Germination under Artificial Accelerated Aging in Transgenic Rice (Oryza sativa L.)

R Wu, Y Ding, C Li, B Wu, Z Huang, Z Li, X Wang… - Agronomy, 2022 - mdpi.com
MYB-type transcription factors play an essential regulatory role in seed germination and the
response to seedling establishment stress. This study isolated a rice R2R3-MYB …

Assessment of five chilling tolerance traits and GWAS mapping in rice using the USDA mini-core collection

MR Schläppi, AK Jackson, GC Eizenga… - Frontiers in plant …, 2017 - frontiersin.org
Rice (Oryza sativa L.) is often exposed to cool temperatures during spring planting in
temperate climates. A better understanding of genetic pathways regulating chilling tolerance …

Integrated Transcriptomic and Metabolomic Analyses Identify Critical Genes and Metabolites Associated with Seed Vigor of Common Wheat

Z Yang, W Chen, T Jia, H Shi, D Sun - International Journal of Molecular …, 2023 - mdpi.com
Seed aging is a common physiological phenomenon during storage which has a great
impact on seed quality. An in-depth analysis of the physiological and molecular mechanisms …

The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice

W Yin, Z Huang, Q Zhong, L Tang, R Wu, S Li, Y Mao… - Plants, 2023 - mdpi.com
Premature senescence is a common occurrence in rice production, and seriously affects rice
plants' nutrient utilization and growth. A total of 120 recombinant inbred lines (RILs) were …

Genome-wide association study reveals the genetic basis of chilling tolerance in rice at the reproductive stage

BY Jeong, Y Lee, Y Kwon, JH Kim, TH Ham, SW Kwon… - Plants, 2021 - mdpi.com
A genome-wide association study (GWAS) was used to investigate the genetic basis of
chilling tolerance in a collection of 117 rice accessions, including 26 Korean landraces and …

A multiomic study uncovers a bZIP23-PER1A–mediated detoxification pathway to enhance seed vigor in rice

WQ Wang, DY Xu, YP Sui, XH Ding… - Proceedings of the …, 2022 - National Acad Sciences
Seed vigor in crops is important in terms of improving grain quality and germplasm
conservation; however, little is known about its regulatory mechanisms through the encoded …

Transcriptome Analysis of Oryza sativa (Rice) Seed Germination at High Temperature Shows Dynamics of Genome Expression Associated with Hormones Signalling …

SK Mangrauthia, S Agarwal, B Sailaja, N Sarla… - Tropical Plant …, 2016 - Springer
Seed germination directly affects growth and yield of rice. Germination process is highly
dependent on temperature which regulates expression of several genes and proteins in …

Genetic Dissection of Seed Dormancy in Rice (Oryza sativa L.) by Using Two Mapping Populations Derived from Common Parents

C Zhang, Z Yuan, Y Wang, W Sun, X Tang, Y Sun, S Yu - Rice, 2020 - Springer
Background Seed dormancy, a quality characteristic that plays a role in seed germination,
seedling establishment and grain yield, is affected by multiple genes and environmental …