Evolution of the mode of nutrition in symbiotic and saprotrophic fungi in forest ecosystems

A Lebreton, Q Zeng, S Miyauchi… - Annual Review of …, 2021 - annualreviews.org
In this review, we highlight the main insights that have been gathered from recent
developments using large-scale genomics of fungal saprotrophs and symbiotrophs …

Effect of fungal-isolate aggressivity on the biosynthesis of symbiosis-related polypeptides in differentiating eucalypt ectomycorrhizas

T Burgess, P Laurent, B Dell, N Malajczuk, F Martin - Planta, 1995 - Springer
Abstract Changes in protein biosynthesis were examined during the early stages of
differentiation of Eucalyptus grandis-Pisolithus tinctorius ectomycorrhizas by two …

Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0

J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …

Comparative genomic and transcriptional analyses of the carbohydrate-active enzymes and secretomes of phytopathogenic fungi reveal their significant roles during …

X Lyu, C Shen, Y Fu, J Xie, D Jiang, G Li, J Cheng - Scientific reports, 2015 - nature.com
Our comparative genomic analysis showed that the numbers of plant cell wall (PCW)-and
fungal cell wall (FCW)-degradation-associated carbohydrate-active enzymes (CAZymes) in …

Methodologies and perspectives of proteomics applied to filamentous fungi: from sample preparation to secretome analysis

L Bianco, G Perrotta - International Journal of Molecular Sciences, 2015 - mdpi.com
Filamentous fungi possess the extraordinary ability to digest complex biomasses and
mineralize numerous xenobiotics, as consequence of their aptitude to sensing the …

An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data

M Braaksma, ES Martens-Uzunova, PJ Punt… - BMC genomics, 2010 - Springer
Background The ecological niche occupied by a fungal species, its pathogenicity and its
usefulness as a microbial cell factory to a large degree depends on its secretome. Protein …

Identification of novel secreted proteases during extracellular proteolysis by dermatophytes at acidic pH

D Sriranganadane, P Waridel, K Salamin… - …, 2011 - Wiley Online Library
The dermatophytes are a group of closely related fungi which are responsible for the great
majority of superficial mycoses in humans and animals. Among various potential virulence …

Indifferent, affectionate, or deceitful: lifestyles and secretomes of fungi

RGT Lowe, BJ Howlett - PLoS pathogens, 2012 - journals.plos.org
Fungi occupy a myriad of niches. They can be free-living (indifferent) as saprophytes
recycling nutrients in the natural environment and/or have a range of relationships …

Molecular signals required for the establishment and maintenance of ectomycorrhizal symbioses

K Garcia, PM Delaux, KR Cope, JM Ané - New Phytologist, 2015 - Wiley Online Library
Ectomycorrhizal (ECM) symbioses are among the most widespread associations between
roots of woody plants and soil fungi in forest ecosystems. These associations contribute …

Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis

JF Challacombe, CN Hesse, LM Bramer, LA McCue… - BMC genomics, 2019 - Springer
Background The dominant fungi in arid grasslands and shrublands are members of the
Ascomycota phylum. Ascomycota fungi are important drivers in carbon and nitrogen cycling …