Comparative genomics provides an operational classification system and reveals early emergence and biased spatio-temporal distribution of SARS-CoV-2
Effective systems for the analysis of molecular data are of fundamental importance for real-
time monitoring of the spread of infectious diseases and the study of pathogen evolution …
time monitoring of the spread of infectious diseases and the study of pathogen evolution …
Comparative genomics reveals early emergence and biased spatiotemporal distribution of SARS-CoV-2
Effective systems for the analysis of molecular data are fundamental for monitoring the
spread of infectious diseases and studying pathogen evolution. The rapid identification of …
spread of infectious diseases and studying pathogen evolution. The rapid identification of …
A snapshot of SARS-CoV-2 genome availability up to 30th March, 2020 and its implications
The SARS-CoV-2 pandemic has been growing exponentially, affecting nearly 900 thousand
people and causing enormous distress to economies and societies worldwide. A plethora of …
people and causing enormous distress to economies and societies worldwide. A plethora of …
Comparative genomics suggests limited variability and similar evolutionary patterns between major clades of SARS-Cov-2
Phylogenomic analysis of SARS-Cov-2 as available from publicly available repositories
suggests the presence of 4 prevalent groups of viral episomes (super-clades), which are …
suggests the presence of 4 prevalent groups of viral episomes (super-clades), which are …
Ongoing positive selection drives the evolution of SARS-CoV-2 genomes
SARS-CoV-2 is a new RNA virus affecting humans and spreads extensively throughout the
world since its first outbreak in December, 2019. Whether the transmissibility and …
world since its first outbreak in December, 2019. Whether the transmissibility and …
[HTML][HTML] Temporal Dynamics and Genomic Landscape of SARS-CoV-2 After Four Years of Evolution
Methods Our analysis incorporates 16,575 complete SARS-CoV-2 sequences collected from
214 countries. These samples were comparatively analyzed, with a detailed characterization …
214 countries. These samples were comparatively analyzed, with a detailed characterization …
[HTML][HTML] Evolutionary analysis and lineage designation of SARS-CoV-2 genomes
The pandemic due to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2),
the etiological agent of coronavirus disease 2019 (COVID-19), has caused immense global …
the etiological agent of coronavirus disease 2019 (COVID-19), has caused immense global …
Evolutionary trajectory of diverse SARS-CoV-2 variants at the beginning of COVID-19 outbreak
JX Lv, X Liu, YY Pei, ZG Song, X Chen, SJ Hu… - Virus …, 2024 - academic.oup.com
Despite extensive scientific efforts directed toward the evolutionary trajectory of severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) in humans at the beginning of the COVID …
respiratory syndrome coronavirus 2 (SARS-CoV-2) in humans at the beginning of the COVID …
Computational analysis and phylogenetic clustering of SARS-CoV-2 genomes
COVID-19, the disease caused by the novel SARS-CoV-2 coronavirus, originated as an
isolated outbreak in the Hubei province of China but soon created a global pandemic and is …
isolated outbreak in the Hubei province of China but soon created a global pandemic and is …
Data-driven identification of SARS-CoV-2 subpopulations using PhenoGraph and binary-coded genomic data
ZK Yang, L Pan, Y Zhang, H Luo… - Briefings in …, 2021 - academic.oup.com
For epidemic prevention and control, the identification of SARS-CoV-2 subpopulations
sharing similar micro-epidemiological patterns and evolutionary histories is necessary for a …
sharing similar micro-epidemiological patterns and evolutionary histories is necessary for a …