Combining structural aggregation propensity and stability predictions to redesign protein solubility
The aggregation propensity of each particular protein seems to be shaped by evolution
according to its natural abundance in the cell. The production and downstream processing …
according to its natural abundance in the cell. The production and downstream processing …
AGGRESCAN3D: toward the prediction of the aggregation propensities of protein structures
Protein aggregation is responsible for the onset and spread of many human diseases,
ranging from neurodegenerative disorders to cancer and diabetes. Moreover, it is one of the …
ranging from neurodegenerative disorders to cancer and diabetes. Moreover, it is one of the …
Aggrescan3D (A3D) 2.0: prediction and engineering of protein solubility
Protein aggregation is a hallmark of a growing number of human disorders and constitutes a
major bottleneck in the manufacturing of therapeutic proteins. Therefore, there is a strong …
major bottleneck in the manufacturing of therapeutic proteins. Therefore, there is a strong …
Aggrescan3D standalone package for structure-based prediction of protein aggregation properties
Abstract Summary Aggrescan3D (A3D) standalone is a multiplatform Python package for
structure-based prediction of protein aggregation properties and rational design of protein …
structure-based prediction of protein aggregation properties and rational design of protein …
Computational re-design of protein structures to improve solubility
Introduction: The rapid development of protein therapeutics is providing life-saving therapies
for a wide range of human diseases. However, degradation reactions limit the quality and …
for a wide range of human diseases. However, degradation reactions limit the quality and …
AGGRESCAN: method, application, and perspectives for drug design
NS De Groot, V Castillo, R Graña-Montes… - … drug discovery and …, 2012 - Springer
Protein aggregation underlies the development of an increasing number of conformational
human diseases of growing incidence, such as Alzheimer's and Parkinson's diseases …
human diseases of growing incidence, such as Alzheimer's and Parkinson's diseases …
Aggrescan4D: structure-informed analysis of pH-dependent protein aggregation
O Bárcenas, A Kuriata, M Zalewski… - Nucleic Acids …, 2024 - academic.oup.com
Protein aggregation is behind the genesis of incurable diseases and imposes constraints on
drug discovery and the industrial production and formulation of proteins. Over the years, we …
drug discovery and the industrial production and formulation of proteins. Over the years, we …
Computational analysis of the amino acid interactions that promote or decrease protein solubility
The solubility of globular proteins is a basic biophysical property that is usually a
prerequisite for their functioning. In this study, we probed the solubility of globular proteins …
prerequisite for their functioning. In this study, we probed the solubility of globular proteins …
[HTML][HTML] Computational prediction of protein aggregation: Advances in proteomics, conformation-specific algorithms and biotechnological applications
Protein aggregation is a widespread phenomenon that stems from the establishment of non-
native intermolecular contacts resulting in protein precipitation. Despite its deleterious …
native intermolecular contacts resulting in protein precipitation. Despite its deleterious …
Solubis: a webserver to reduce protein aggregation through mutation
J Van Durme, G De Baets… - Protein Engineering …, 2016 - academic.oup.com
Protein aggregation is a major factor limiting the biotechnological and therapeutic
application of many proteins, including enzymes and monoclonal antibodies. The molecular …
application of many proteins, including enzymes and monoclonal antibodies. The molecular …
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