[HTML][HTML] Identifying pre-disease signals before metabolic syndrome in mice by dynamical network biomarkers

K Koizumi, M Oku, S Hayashi, A Inujima, N Shibahara… - Scientific reports, 2019 - nature.com
The establishment of new therapeutic strategies for metabolic syndrome is urgently needed
because metabolic syndrome, which is characterized by several disorders, such as …

Detecting tissue-specific early warning signals for complex diseases based on dynamical network biomarkers: study of type 2 diabetes by cross-tissue analysis

M Li, T Zeng, R Liu, L Chen - Briefings in bioinformatics, 2014 - academic.oup.com
Identifying early warning signals of critical transitions during disease progression is a key to
achieving early diagnosis of complex diseases. By exploiting rich information of high …

[HTML][HTML] Dynamical network biomarkers: Theory and applications

K Aihara, R Liu, K Koizumi, X Liu, L Chen - Gene, 2022 - Elsevier
This paper reviews theory of DNB (Dynamical Network Biomarkers) and its applications
including both modern medicine and traditional medicine. We show that omics data such as …

[HTML][HTML] Detecting the tipping points in a three-state model of complex diseases by temporal differential networks

P Chen, Y Li, X Liu, R Liu, L Chen - Journal of translational medicine, 2017 - Springer
Background The progression of complex diseases, such as diabetes and cancer, is
generally a nonlinear process with three stages, ie, normal state, pre-disease state, and …

Dynamical network biomarkers for identifying critical transitions and their driving networks of biologic processes

R Liu, K Aihara, L Chen - Quantitative Biology, 2013 - Springer
Non-smooth or even abrupt state changes exist during many biological processes, eg, cell
differentiation processes, proliferation processes, or even disease deterioration processes …

[HTML][HTML] Detecting early-warning signals of type 1 diabetes and its leading biomolecular networks by dynamical network biomarkers

X Liu, R Liu, XM Zhao, L Chen - BMC medical genomics, 2013 - Springer
Abstract Background Type 1 diabetes (T1D) is a complex disease and harmful to human
health, and most of the existing biomarkers are mainly to measure the disease phenotype …

Early diagnosis of complex diseases by molecular biomarkers, network biomarkers, and dynamical network biomarkers

R Liu, X Wang, K Aihara, L Chen - Medicinal research reviews, 2014 - Wiley Online Library
Many studies have been carried out for early diagnosis of complex diseases by finding
accurate and robust biomarkers specific to respective diseases. In particular, recent rapid …

[HTML][HTML] Quantifying critical states of complex diseases using single-sample dynamic network biomarkers

X Liu, X Chang, R Liu, X Yu, L Chen… - PLoS computational …, 2017 - journals.plos.org
Dynamic network biomarkers (DNB) can identify the critical state or tipping point of a
disease, thereby predicting rather than diagnosing the disease. However, it is difficult to …

Deciphering early development of complex diseases by progressive module network

T Zeng, C Zhang, W Zhang, R Liu, J Liu, L Chen - Methods, 2014 - Elsevier
There is no effective cure nowadays for many complex diseases, and thus it is crucial to
detect and further treat diseases in earlier stages. Generally, the development and …

[HTML][HTML] Detecting early-warning signals for sudden deterioration of complex diseases by dynamical network biomarkers

L Chen, R Liu, ZP Liu, M Li, K Aihara - Scientific reports, 2012 - nature.com
Considerable evidence suggests that during the progression of complex diseases, the
deteriorations are not necessarily smooth but are abrupt and may cause a critical transition …