[HTML][HTML] Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome
C Saintenac, D Jiang, ED Akhunov - Genome biology, 2011 - Springer
Background The ability of grass species to adapt to various habitats is attributed to the
dynamic nature of their genomes, which have been shaped by multiple rounds of ancient …
dynamic nature of their genomes, which have been shaped by multiple rounds of ancient …
Uncovering hidden variation in polyploid wheat
KV Krasileva, HA Vasquez-Gross… - Proceedings of the …, 2017 - National Acad Sciences
Comprehensive reverse genetic resources, which have been key to understanding gene
function in diploid model organisms, are missing in many polyploid crops. Young polyploid …
function in diploid model organisms, are missing in many polyploid crops. Young polyploid …
[HTML][HTML] A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes
Background Bread wheat is an allopolyploid species with a large, highly repetitive genome.
To investigate the impact of selection on variants distributed among homoeologous wheat …
To investigate the impact of selection on variants distributed among homoeologous wheat …
Combining traditional mutagenesis with new high-throughput sequencing and genome editing to reveal hidden variation in polyploid wheat
Induced mutations have been used to generate novel variation for breeding purposes since
the early 1900s. However, the combination of this old technology with the new capabilities of …
the early 1900s. However, the combination of this old technology with the new capabilities of …
Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat
Cycles of whole-genome duplication (WGD) and diploidization are hallmarks of eukaryotic
genome evolution and speciation. Polyploid wheat (Triticum aestivum) has had a massive …
genome evolution and speciation. Polyploid wheat (Triticum aestivum) has had a massive …
[HTML][HTML] Homoeolog-specific transcriptional bias in allopolyploid wheat
AR Akhunova, RT Matniyazov, H Liang, ED Akhunov - BMC genomics, 2010 - Springer
Background Interaction between parental genomes is accompanied by global changes in
gene expression which, eventually, contributes to growth vigor and the broader phenotypic …
gene expression which, eventually, contributes to growth vigor and the broader phenotypic …
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …
Advances in genome sequencing and assembly technologies are generating many high-
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
Applying the latest advances in genomics and phenomics for trait discovery in polyploid wheat
Improving traits in wheat has historically been challenging due to its large and polyploid
genome, limited genetic diversity and in‐field phenotyping constraints. However, within …
genome, limited genetic diversity and in‐field phenotyping constraints. However, within …
[HTML][HTML] Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat
Allopolyploidy greatly expands the range of possible regulatory interactions among
functionally redundant homoeologous genes. However, connection between the emerging …
functionally redundant homoeologous genes. However, connection between the emerging …
[HTML][HTML] Mutation scanning in wheat by exon capture and next-generation sequencing
R King, N Bird, R Ramirez-Gonzalez, JA Coghill… - PLoS …, 2015 - journals.plos.org
Targeted Induced Local Lesions in Genomes (TILLING) is a reverse genetics approach to
identify novel sequence variation in genomes, with the aims of investigating gene function …
identify novel sequence variation in genomes, with the aims of investigating gene function …
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