Breast cancer methylomes establish an epigenomic foundation for metastasis

F Fang, S Turcan, A Rimner, A Kaufman… - Science translational …, 2011 - science.org
Cancer-specific alterations in DNA methylation are hallmarks of human malignancies;
however, the nature of the breast cancer epigenome and its effects on metastatic behavior …

Genome-wide DNA methylation profiling of CpG islands in breast cancer identifies novel genes associated with tumorigenicity

VK Hill, C Ricketts, I Bieche, S Vacher, D Gentle… - Cancer research, 2011 - AACR
Epigenetic profiling of tumor DNAs may reveal important new theranostic targets to improve
prognosis and treatment of advanced cancer patients. In this study, we performed a genome …

Genome-wide methylation analysis identifies genes specific to breast cancer hormone receptor status and risk of recurrence

MJ Fackler, CB Umbricht, D Williams, P Argani… - Cancer research, 2011 - AACR
To better understand the biology of hormone receptor–positive and–negative breast cancer
and to identify methylated gene markers of disease progression, we carried out a genome …

Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing

Y Ruike, Y Imanaka, F Sato, K Shimizu, G Tsujimoto - BMC genomics, 2010 - Springer
Background Cancer cells undergo massive alterations to their DNA methylation patterns that
result in aberrant gene expression and malignant phenotypes. However, the mechanisms …

Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

BP de Almeida, JD Apolónio, A Binnie… - BMC cancer, 2019 - Springer
Background Breast cancer is a highly heterogeneous disease resulting in diverse clinical
behaviours and therapeutic responses. DNA methylation is a major epigenetic alteration that …

DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation

RN Batra, A Lifshitz, AT Vidakovic, SF Chin… - Nature …, 2021 - nature.com
DNA methylation is aberrant in cancer, but the dynamics, regulatory role and clinical
implications of such epigenetic changes are still poorly understood. Here, reduced …

Genome-wide DNA methylation profiles in progression to in situand invasive carcinoma of the breast with impact on gene transcription and prognosis

T Fleischer, A Frigessi, KC Johnson, H Edvardsen… - Genome biology, 2014 - Springer
Background Ductal carcinoma in situ (DCIS) of the breast is a precursor of invasive breast
carcinoma. DNA methylation alterations are thought to be an early event in progression of …

An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells

K Holm, J Staaf, M Lauss, M Aine, D Lindgren… - Breast Cancer …, 2016 - Springer
Background Aberrant DNA methylation is frequently observed in breast cancer. However,
the relationship between methylation patterns and the heterogeneity of breast cancer has …

Whole-genome bisulfite sequencing of cell-free DNA identifies signature associated with metastatic breast cancer

C Legendre, GC Gooden, K Johnson, RA Martinez… - Clinical …, 2015 - Springer
Background A number of clinico-pathological criteria and molecular profiles have been used
to stratify patients into high-and low-risk groups. Currently, there are still no effective …

Methylation of homeobox genes is a frequent and early epigenetic event in breast cancer

S Tommasi, DL Karm, X Wu, Y Yen, GP Pfeifer - Breast Cancer Research, 2009 - Springer
Abstract Introduction Aberrant methylation of CpG islands is a hallmark of cancer and occurs
at an early stage in breast tumorigenesis. However, its impact on tumor development is not …