An insight into the gene expression evolution in Gossypium species based on the leaf transcriptomes

Y Wu, R Sun, T Huan, Y Zhao, D Yu, Y Sun - BMC genomics, 2024 - Springer
Background Gene expression pattern is associated with biological phenotype and is widely
used in exploring gene functions. Its evolution is also crucial in understanding species …

Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation

LE Flagel, JF Wendel - New Phytologist, 2010 - Wiley Online Library
Here, we describe the evolution of gene expression among a diversified cohort of five
allopolyploid species in the cotton genus (Gossypium). Using this phylogenetic framework …

The genome sequence of Sea-Island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres

D Yuan, Z Tang, M Wang, W Gao, L Tu, X Jin, L Chen… - Scientific reports, 2015 - nature.com
Gossypium hirsutum contributes the most production of cotton fibre, but G. barbadense is
valued for its better comprehensive resistance and superior fibre properties. However, the …

The cotton fiber transcriptome

TA Wilkins, AB Arpat - Physiologia plantarum, 2005 - Wiley Online Library
Among the longest cell types known in plants, cotton fibers are economically important seed
trichomes that provide a unique single‐celled model system for studying fundamental …

A majority of cotton genes are expressed in single-celled fiber

R Hovav, JA Udall, E Hovav, R Rapp, L Flagel… - Planta, 2008 - Springer
Multicellular eukaryotes contain a diversity of cell types, presumably differing from one
another in the suite of genes expressed during development. At present, little is known about …

Expression patterns and functional divergence of homologous genes accompanied by polyploidization in cotton (Gossypium hirsutum L.)

Z Peng, H Cheng, G Sun, Z Pan, X Wang… - Science China Life …, 2020 - Springer
Naturally allotetraploid cotton has been widely used as an ideal model to investigate gene
expression remodeling as a consequence of polyploidization. However, the global gene …

Comparative transcriptome analysis of fiber and nonfiber tissues to identify the genes preferentially expressed in fiber development in Gossypium hirsutum

J Yang, L Gao, X Liu, X Zhang, X Wang, Z Wang - Scientific Reports, 2021 - nature.com
Cotton is an important natural fiber crop and economic crop worldwide. The quality of cotton
fiber directly determines the quality of cotton textiles. Identifying cotton fiber development …

Cotton fiber elongation network revealed by expression profiling of longer fiber lines introgressed with different Gossypium barbadense chromosome segments

L Fang, R Tian, X Li, J Chen, S Wang, P Wang… - BMC genomics, 2014 - Springer
Background Cotton fiber, a highly elongated, thickened single cell of the seed epidermis, is
a powerful cell wall research model. Fiber length, largely determined during the elongation …

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

T Zhang, Y Hu, W Jiang, L Fang, X Guan, J Chen… - Nature …, 2015 - nature.com
Upland cotton is a model for polyploid crop domestication and transgenic improvement.
Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by …

The Li2 Mutation Results in Reduced Subgenome Expression Bias in Elongating Fibers of Allotetraploid Cotton (Gossypium hirsutum L.)

M Naoumkina, G Thyssen, DD Fang, DJ Hinchliffe… - PLoS …, 2014 - journals.plos.org
Next generation sequencing (RNA-seq) technology was used to evaluate the effects of the
Ligon lintless-2 (Li2) short fiber mutation on transcriptomes of both subgenomes of …