Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database
A total of 28,432 unique contigs (25,371 in consensus contigs and 3,061 as singletons) were
assembled from all 268,786 cotton ESTs currently available. Several in silico approaches …
assembled from all 268,786 cotton ESTs currently available. Several in silico approaches …
Transcriptome Profiling of Gossypium anomalum Seedlings Reveals Key Regulators and Metabolic Pathways in Response to Drought Stress
W Ji, H Yu, Y Shangguan, J Cao, X Chen, L Zhao… - Plants, 2023 - mdpi.com
Drought stress is a key limiting factor for cotton (Gossypium spp.) growth, production,
development, and production worldwide. Some wild diploid cotton species are remarkably …
development, and production worldwide. Some wild diploid cotton species are remarkably …
Using RNA-Seq data to evaluate reference genes suitable for gene expression studies in soybean
Differential gene expression profiles often provide important clues for gene functions. While
reverse transcription quantitative real-time polymerase chain reaction (RT-qPCR) is an …
reverse transcription quantitative real-time polymerase chain reaction (RT-qPCR) is an …
Digital gene expression analysis of mature seeds of transgenic maize overexpressing Aspergillus niger phyA2 and its non-transgenic counterpart
The next generation sequencing technologies have been recently used for transcriptome
analysis in many organisms because of the decreased sequencing cost and increased …
analysis in many organisms because of the decreased sequencing cost and increased …
The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution
Cotton is an important crop that has made significant gains in production over the last
century. Emerging pests such as the reniform nematode have threatened cotton production …
century. Emerging pests such as the reniform nematode have threatened cotton production …
Genome-Wide Mining and Characterization of SSR Markers for Gene Mapping and Gene Diversity in Gossypium barbadense L. and Gossypium darwinii G. Watt …
A Ditta, Z Zhou, X Cai, M Shehzad, X Wang… - Agronomy, 2018 - mdpi.com
The present study aimed to characterize the simple sequence repeat markers in cotton using
the cotton expressed sequence tags. A total of 111 EST-SSR polymorphic molecular …
the cotton expressed sequence tags. A total of 111 EST-SSR polymorphic molecular …
CottonGen: the community database for cotton genomics, genetics, and breeding research
J Yu, S Jung, CH Cheng, T Lee, P Zheng, K Buble… - Plants, 2021 - mdpi.com
Over the last eight years, the volume of whole genome, gene expression, SNP genotyping,
and phenotype data generated by the cotton research community has exponentially …
and phenotype data generated by the cotton research community has exponentially …
Development of New Candidate Gene and EST‐Based Molecular Markers for Gossypium Species
R Buyyarapu, RV Kantety, JZ Yu… - … Journal of Plant …, 2011 - Wiley Online Library
New source of molecular markers accelerate the efforts in improving cotton fiber traits and
aid in developing high‐density integrated genetic maps. We developed new markers based …
aid in developing high‐density integrated genetic maps. We developed new markers based …
Deciphering the complex cotton genome for improving fiber traits and abiotic stress resilience in sustainable agriculture
A Manivannan, T Cheeran Amal - Molecular Biology Reports, 2023 - Springer
Background Understanding the complex cotton genome is of paramount importance in
devising a strategy for sustainable agriculture. Cotton is probably the most economically …
devising a strategy for sustainable agriculture. Cotton is probably the most economically …
Selection and validation of reference genes for RT-qPCR analysis in Desmodium styracifolium Merr
Z Wang, F Yu, D Shi, Y Wang, F Xu, S Zeng - 3 Biotech, 2021 - Springer
Gene expression valuated by reverse transcription-quantitative PCR (RT-qPCR) are often
applied to study the gene function. To obtain accurate and reliable results, the usage of …
applied to study the gene function. To obtain accurate and reliable results, the usage of …