CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants
Abstract Summary The CoV-Spectrum website supports the identification of new SARS-CoV-
2 variants of concern and the tracking of known variants. Its flexible amino acid and …
2 variants of concern and the tracking of known variants. Its flexible amino acid and …
[HTML][HTML] Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC
K Jahn, D Dreifuss, I Topolsky, A Kull… - Nature …, 2022 - nature.com
The continuing emergence of SARS-CoV-2 variants of concern and variants of interest
emphasizes the need for early detection and epidemiological surveillance of novel variants …
emphasizes the need for early detection and epidemiological surveillance of novel variants …
[HTML][HTML] Variant-specific deleterious mutations in the SARS-CoV-2 genome reveal immune responses and potentials for prophylactic vaccine development
Introduction: Coronavirus disease 2019 (COVID-19), caused by SARS-CoV-2, has had a
disastrous effect worldwide during the previous three years due to widespread infections …
disastrous effect worldwide during the previous three years due to widespread infections …
A Sanger-based approach for scaling up screening of SARS-CoV-2 variants of interest and concern
MF Bezerra, LC Machado, VCV De Carvalho… - Infection, Genetics and …, 2021 - Elsevier
The global spread of new SARS-CoV-2 variants of concern underscore an urgent need of
simple deployed molecular tools that can differentiate these lineages. Several tools and …
simple deployed molecular tools that can differentiate these lineages. Several tools and …
SARS-CoV-2 variants and their relevant mutational profiles: update summer 2021
M Alkhatib, V Svicher, R Salpini… - Microbiology …, 2021 - Am Soc Microbiol
Since the beginning of the coronavirus disease 2019 (COVID-19) pandemic caused by it,
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been undergoing a …
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been undergoing a …
[HTML][HTML] HAVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences
PT Truong Nguyen, I Plyusnin, T Sironen… - BMC …, 2021 - Springer
Background SARS-CoV-2 related research has increased in importance worldwide since
December 2019. Several new variants of SARS-CoV-2 have emerged globally, of which the …
December 2019. Several new variants of SARS-CoV-2 have emerged globally, of which the …
Emergence of genomic diversity and recurrent mutations in SARS-CoV-2
SARS-CoV-2 is a SARS-like coronavirus of likely zoonotic origin first identified in December
2019 in Wuhan, the capital of China's Hubei province. The virus has since spread globally …
2019 in Wuhan, the capital of China's Hubei province. The virus has since spread globally …
The emergence of SARS-CoV-2 variants of concern is driven by acceleration of the substitution rate
The ongoing SARS-CoV-2 pandemic has seen an unprecedented amount of rapidly
generated genome data. These data have revealed the emergence of lineages with …
generated genome data. These data have revealed the emergence of lineages with …
[HTML][HTML] SARS-CoV-2 lineage B. 1.526 emerging in the New York region detected by software utility created to query the spike mutational landscape
AP West, CO Barnes, Z Yang, PJ Bjorkman - BioRxiv, 2021 - biorxiv.org
Abstract Wide-scale SARS-CoV-2 genome sequencing is critical to monitoring and
understanding viral evolution during the ongoing pandemic. Variants first detected in the …
understanding viral evolution during the ongoing pandemic. Variants first detected in the …
[HTML][HTML] Analysis of SARS-CoV-2 variants from 24,181 patients exemplifies the role of globalization and zoonosis in pandemics
P Colson, PE Fournier, H Chaudet, J Delerce… - Frontiers in …, 2022 - frontiersin.org
After the end of the first epidemic episode of SARS-CoV-2 infections, as cases began to rise
again during the summer of 2020, we at IHU Méditerranée Infection in Marseille, France …
again during the summer of 2020, we at IHU Méditerranée Infection in Marseille, France …
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