Transcriptome-wide analysis of exosome targets

C Schneider, G Kudla, W Wlotzka, A Tuck, D Tollervey - Molecular cell, 2012 - cell.com
The exosome plays major roles in RNA processing and surveillance but the in vivo target
range and substrate acquisition mechanisms remain unclear. Here we apply in vivo RNA …

Transcriptome-wide analysis of alternative routes for RNA substrates into the exosome complex

C Delan-Forino, C Schneider, D Tollervey - PLoS genetics, 2017 - journals.plos.org
The RNA exosome complex functions in both the accurate processing and rapid
degradation of many classes of RNA. Functional and structural analyses indicate that RNA …

Threading the barrel of the RNA exosome

C Schneider, D Tollervey - Trends in biochemical sciences, 2013 - cell.com
In eukaryotes, the exosome complex degrades RNA backbones and plays key roles in RNA
processing and surveillance. It was predicted that RNA substrates are threaded through a …

Genome-wide analysis reveals distinct substrate specificities of Rrp6, Dis3, and core exosome subunits

DL Kiss, ED Andrulis - Rna, 2010 - rnajournal.cshlp.org
The RNA processing exosome complex was originally defined as an evolutionarily
conserved multisubunit complex of ribonucleases responsible for the processing and/or …

Extensive degradation of RNA precursors by the exosome in wild-type cells

RK Gudipati, Z Xu, A Lebreton, B Séraphin… - Molecular cell, 2012 - cell.com
The exosome is a complex involved in the maturation of rRNA and sn-snoRNA, in the
degradation of short-lived noncoding RNAs, and in the quality control of RNAs produced in …

[HTML][HTML] The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation

F Bonneau, J Basquin, J Ebert, E Lorentzen, E Conti - Cell, 2009 - cell.com
The exosome is a conserved macromolecular complex essential for RNA degradation. The
nine-subunit core of the eukaryotic exosome shares a similar barrel-like architecture with …

The Rrp6 C-terminal domain binds RNA and activates the nuclear RNA exosome

EV Wasmuth, CD Lima - Nucleic acids research, 2017 - academic.oup.com
The eukaryotic RNA exosome is an essential, multi-subunit complex that catalyzes RNA
turnover, maturation, and quality control processes. Its non-catalytic donut-shaped core …

The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis

M Lubas, PR Andersen, A Schein, A Dziembowski… - Cell reports, 2015 - cell.com
The RNA exosome complex constitutes the major nuclear eukaryotic 3′-5′ exonuclease.
Outside of nucleoli, the human nucleoplasmic exosome is directed to some of its substrates …

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing

Y Chen, Y Li, RS Dai, JC Savage, U Shinde… - Nucleic acids …, 2023 - academic.oup.com
The RNA exosome is an essential 3′ to 5′ exoribonuclease complex that mediates
degradation, processing and quality control of virtually all eukaryotic RNAs. The nucleolar …

Targeting RNA for processing or destruction by the eukaryotic RNA exosome and its cofactors

JC Zinder, CD Lima - Genes & development, 2017 - genesdev.cshlp.org
The eukaryotic RNA exosome is an essential and conserved protein complex that can
degrade or process RNA substrates in the 3′-to-5′ direction. Since its discovery nearly …