Activating transcription in bacteria
Bacteria use a variety of mechanisms to direct RNA polymerase to specific promoters in
order to activate transcription in response to growth signals or environmental cues …
order to activate transcription in response to growth signals or environmental cues …
Bacterial regulatory networks are extremely flexible in evolution
I Lozada-Chavez, SC Janga… - Nucleic acids …, 2006 - academic.oup.com
Over millions of years the structure and complexity of the transcriptional regulatory network
(TRN) in bacteria has changed, reorganized and enabled them to adapt to almost every …
(TRN) in bacteria has changed, reorganized and enabled them to adapt to almost every …
Unknown unknowns: essential genes in quest for function
The experimental design of a minimal synthetic genome revealed the presence of a large
number of genes without ascribed function, in part because the abstract laws of life must be …
number of genes without ascribed function, in part because the abstract laws of life must be …
Synthetic biology-inspired strategies and tools for engineering of microbial natural product biosynthetic pathways
K Alam, J Hao, Y Zhang, A Li - Biotechnology Advances, 2021 - Elsevier
Microbial-derived natural products (NPs) and their derivative products are of great
importance and used widely in many fields, especially in pharmaceutical industries …
importance and used widely in many fields, especially in pharmaceutical industries …
Motifs, modules and games in bacteria
DM Wolf, AP Arkin - Current opinion in microbiology, 2003 - Elsevier
Global explorations of regulatory network dynamics, organization and evolution have
become tractable thanks to high-throughput sequencing and molecular measurement of …
become tractable thanks to high-throughput sequencing and molecular measurement of …
A predictive biophysical model of translational coupling to coordinate and control protein expression in bacterial operons
Natural and engineered genetic systems require the coordinated expression of proteins. In
bacteria, translational coupling provides a genetically encoded mechanism to control …
bacteria, translational coupling provides a genetically encoded mechanism to control …
Hierarchy and feedback in the evolution of the Escherichia coli transcription network
M Cosentino Lagomarsino, P Jona… - Proceedings of the …, 2007 - National Acad Sciences
The Escherichia coli transcription network has an essentially feedforward structure, with
abundant feedback at the level of self-regulations. Here, we investigate how these …
abundant feedback at the level of self-regulations. Here, we investigate how these …
Metabolic engineering in the-omics era: elucidating and modulating regulatory networks
GN Vemuri, AA Aristidou - Microbiology and Molecular Biology …, 2005 - Am Soc Microbiol
The importance of regulatory control in metabolic processes is widely acknowledged, and
several enquiries (both local and global) are being made in understanding regulation at …
several enquiries (both local and global) are being made in understanding regulation at …
Regulation of bacterial gene expression by transcription attenuation
CL Turnbough Jr - Microbiology and Molecular Biology Reviews, 2019 - Am Soc Microbiol
SUMMARY A wide variety of mechanisms that control gene expression in bacteria are
based on conditional transcription termination. Generally, in these mechanisms, a …
based on conditional transcription termination. Generally, in these mechanisms, a …
[HTML][HTML] Functional organisation of Escherichia coli transcriptional regulatory network
Taking advantage of available functional data associated with 115 transcription and 7 sigma
factors, we have performed a structural analysis of the regulatory network of Escherichia coli …
factors, we have performed a structural analysis of the regulatory network of Escherichia coli …