Single‐cell transcriptome profiling reveals diverse immune cell populations and their responses to viral infection in the spleen of zebrafish

CB Hu, J Wang, Y Hong, H Li, DD Fan… - The FASEB …, 2023 - Wiley Online Library
Teleost fish are indispensable model organisms for comparative immunology research that
should lead to an improved understanding of the general principles of vertebrate immune …

RNA-seq of single fish cells–seeking out the leukocytes mediating immunity in teleost fishes

JTH Chan, S Kadri, B Köllner, A Rebl… - Frontiers in …, 2022 - frontiersin.org
The immune system is a complex and sophisticated biological system, spanning multiple
levels of complexity, from the molecular level to that of tissue. Our current understanding of …

Characterization of pipefish immune cell populations through single-cell transcriptomics

J Parker, NC Guslund, S Jentoft, O Roth - Frontiers in Immunology, 2022 - frontiersin.org
Teleost adaptive immune systems have evolved with more flexibility than previously
assumed. A particularly enigmatic system to address immune system modifications in the …

Single-nuclei transcriptome analysis of channel catfish spleen provides insight into the immunome of an aquaculture-relevant species

JE Aldersey, MD Lange, BH Beck, JW Abernathy - PloS one, 2024 - journals.plos.org
The catfish industry is the largest sector of US aquaculture production. Given its role in food
production, the catfish immune response to industry-relevant pathogens has been …

[HTML][HTML] Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection

J Sun, RR Daniels, A Balic, AMS Andresen… - Fish & Shellfish …, 2024 - Elsevier
The spleen is a conserved secondary lymphoid organ that emerged in parallel to adaptive
immunity in early jawed vertebrates. Recent studies have applied single cell transcriptomics …

Single-cell transcriptome analysis of fish immune cells provides insight into the evolution of vertebrate immune cell types

SJ Carmona, SA Teichmann, L Ferreira… - Genome …, 2017 - genome.cshlp.org
The immune system of vertebrate species consists of many different cell types that have
distinct functional roles and are subject to different evolutionary pressures. Here, we first …

[HTML][HTML] Multi-tissue scRNA-seq reveals immune cell landscape of turbot (Scophthalmus maximus)

W Chen, J Huang, W Wang, Y Wang, H Chen… - Fundamental …, 2022 - Elsevier
In vertebrates, bony fishes possess not only innate immune cells but also T and B cells that
are equivalent to those in mammals. However, the precise sub-cluster of immune cells in …

Single-cell analyses reveal early thymic progenitors and pre-B cells in zebrafish

SA Rubin, CS Baron, C Pessoa Rodrigues… - Journal of Experimental …, 2022 - rupress.org
The zebrafish has proven to be a valuable model organism for studying hematopoiesis, but
relatively little is known about zebrafish immune cell development and functional diversity …

Full-length transcriptome: A reliable alternative for single-cell RNA-seq analysis in the spleen of teleost without reference genome

L Huang, Y Qiao, W Xu, L Gong, R He, W Qi… - Frontiers in …, 2021 - frontiersin.org
Fish is considered as a supreme model for clarifying the evolution and regulatory
mechanism of vertebrate immunity. However, the knowledge of distinct immune cell …

Single-cell RNA sequencing reveals microevolution of the stickleback immune system

LE Fuess, DI Bolnick - Genome Biology and Evolution, 2023 - academic.oup.com
The risk and severity of pathogen infections in humans, livestock, or wild organisms depend
on host immune function, which can vary between closely related host populations or even …