Divergence of a conserved elongation factor and transcription regulation in budding and fission yeast

GT Booth, IX Wang, VG Cheung, JT Lis - Genome research, 2016 - genome.cshlp.org
Complex regulation of gene expression in mammals has evolved from simpler eukaryotic
systems, yet the mechanistic features of this evolution remain elusive. Here, we compared …

Transcription elongation is finely tuned by dozens of regulatory factors

M Couvillion, KM Harlen, KC Lachance, KL Trotta… - Elife, 2022 - elifesciences.org
Understanding the complex network that regulates transcription elongation requires the
quantitative analysis of RNA polymerase II (Pol II) activity in a wide variety of regulatory …

RNA polymerase II-independent recruitment of SPT6L at transcription start sites in Arabidopsis

C Chen, J Shu, C Li, RK Thapa, V Nguyen… - Nucleic acids …, 2019 - academic.oup.com
SPT6 is a conserved elongation factor that is associated with phosphorylated RNA
polymerase II (RNAPII) during transcription. Recent transcriptome analysis in yeast mutants …

Transcription elongation: The 'Foggy'is lifting…

DAR Zorio, DL Bentley - Current Biology, 2001 - cell.com
Transcription can be controlled by regulating either the initiation or elongation of RNA
chains. Recent studies highlight the importance of an elongation regulator, Spt5, in …

Spt6 enhances the elongation rate of RNA polymerase II in vivo

MB Ardehali, J Yao, K Adelman, NJ Fuda… - The EMBO …, 2009 - embopress.org
Several eukaryotic transcription factors have been shown to modulate the elongation rate of
RNA polymerase II (Pol II) on naked or chromatin‐reconstituted templates in vitro. However …

Regulon-specific control of transcription elongation across the yeast genome

V Pelechano, S Jimeno-Gonzalez… - PLoS …, 2009 - journals.plos.org
Transcription elongation by RNA polymerase II was often considered an invariant non-
regulated process. However, genome-wide studies have shown that transcriptional pausing …

[HTML][HTML] Genome-wide single-molecule footprinting reveals high RNA polymerase II turnover at paused promoters

AR Krebs, D Imanci, L Hoerner, D Gaidatzis, L Burger… - Molecular cell, 2017 - cell.com
Transcription initiation entails chromatin opening followed by pre-initiation complex
formation and RNA polymerase II recruitment. Subsequent polymerase elongation requires …

RNA Polymerase II Elongation Factors of Saccharomyces cerevisiae: a Targeted Proteomics Approach

NJ Krogan, M Kim, SH Ahn, G Zhong… - … and cellular biology, 2002 - Taylor & Francis
To physically characterize the web of interactions connecting the Saccharomyces cerevisiae
proteins suspected to be RNA polymerase II (RNAPII) elongation factors, subunits of …

A coordinated codon-dependent regulation of translation by Elongator

F Bauer, D Hermand - Cell Cycle, 2012 - Taylor & Francis
More than a decade ago, the purification of the form of the RNA polymerase II (PolII)
engaged in elongation led to the discovery of an associated, multi-subunit (Elp1-6) complex …

Evidence that the Localization of the Elongation Factor Spt16 Across Transcribed Genes Is Dependent Upon Histone H3 Integrity in Saccharomyces cerevisiae

AA Duina, A Rufiange, J Bracey, J Hall, A Nourani… - Genetics, 2007 - academic.oup.com
A previous study of histone H3 in Saccharomyces cerevisiae identified a mutant with a
single amino acid change, leucine 61 to tryptophan, that confers several transcriptional …