Genome divergence during evolutionary diversification as revealed in replicate lake–stream stickleback population pairs

M Roesti, AP Hendry, W Salzburger… - Molecular ecology, 2012 - Wiley Online Library
Evolutionary diversification is often initiated by adaptive divergence between populations
occupying ecologically distinct environments while still exchanging genes. The genetic …

Recombination in the threespine stickleback genome—patterns and consequences

M Roesti, D Moser, D Berner - Molecular ecology, 2013 - Wiley Online Library
Heterogeneity in recombination rate may strongly influence genome evolution and entail
methodological challenges to genomic investigation. Nevertheless, a solid understanding of …

The impact of selection, gene flow and demographic history on heterogeneous genomic divergence: Three‐spine sticklebacks in divergent environments

AL Ferchaud, MM Hansen - Molecular Ecology, 2016 - Wiley Online Library
Heterogeneous genomic divergence between populations may reflect selection, but should
also be seen in conjunction with gene flow and drift, particularly population bottlenecks …

Contrasting effects of environment and genetics generate a continuum of parallel evolution

YE Stuart, T Veen, JN Weber, D Hanson… - Nature ecology & …, 2017 - nature.com
Parallel evolution of similar traits by independent populations in similar environments is
considered strong evidence for adaptation by natural selection. Often, however, replicate …

The genomics of ecological vicariance in threespine stickleback fish

M Roesti, B Kueng, D Moser, D Berner - Nature communications, 2015 - nature.com
Populations occurring in similar habitats and displaying similar phenotypes are increasingly
used to explore parallel evolution at the molecular level. This generally ignores the …

Parallel and nonparallel aspects of ecological, phenotypic, and genetic divergence across replicate population pairs of lake and stream stickleback

R Kaeuffer, CL Peichel, DI Bolnick, AP Hendry - Evolution, 2012 - academic.oup.com
Parallel (or convergent) evolution provides strong evidence for a deterministic role of natural
selection: similar phenotypes evolve when independent populations colonize similar …

Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes

PA Hohenlohe, S Bassham… - … Transactions of the …, 2012 - royalsocietypublishing.org
Population genomic studies are beginning to provide a more comprehensive view of
dynamic genome-scale processes in evolution. Patterns of genomic architecture, such as …

Ecological factors and morphological traits are associated with repeated genomic differentiation between lake and stream stickleback

DJ Rennison, YE Stuart… - … Transactions of the …, 2019 - royalsocietypublishing.org
The repeated evolution of similar phenotypes in independent populations (ie parallel or
convergent evolution) provides an opportunity to identify genetic and ecological factors that …

Repeated selection of alternatively adapted haplotypes creates sweeping genomic remodeling in stickleback

S Bassham, J Catchen, E Lescak, FA von Hippel… - Genetics, 2018 - academic.oup.com
After the catastrophic 1964 Alaskan earthquake, marine stickleback colonized newly created
ponds on seismically uplifted islands. Bassham and Catchen et al. show that, in replicate …

Genomics of divergence along a continuum of parapatric population differentiation

PGD Feulner, FJJ Chain, M Panchal, Y Huang… - PLoS …, 2015 - journals.plos.org
The patterns of genomic divergence during ecological speciation are shaped by a
combination of evolutionary forces. Processes such as genetic drift, local reduction of gene …