[HTML][HTML] Constructing integrated networks for identifying new secondary metabolic pathway regulators in grapevine: recent applications and future opportunities
Representing large biological data as networks is becoming increasingly adopted for
predicting gene function while elucidating the multifaceted organization of life processes. In …
predicting gene function while elucidating the multifaceted organization of life processes. In …
[HTML][HTML] Drawing Links from Transcriptome to Metabolites: The Evolution of Aroma in the Ripening Berry of Moscato Bianco (Vitis vinifera L.)
Monoterpenes confer typical floral notes to “Muscat” grapevine varieties and, to a lesser
extent, to other aromatic non-Muscat varieties. Previous studies have led to the identification …
extent, to other aromatic non-Muscat varieties. Previous studies have led to the identification …
[HTML][HTML] Omics approaches for understanding grapevine berry development: regulatory networks associated with endogenous processes and environmental …
A Serrano, C Espinoza, G Armijo… - Frontiers in plant …, 2017 - frontiersin.org
Grapevine fruit development is a dynamic process that can be divided into three stages:
formation (I), lag (II), and ripening (III), in which physiological and biochemical changes …
formation (I), lag (II), and ripening (III), in which physiological and biochemical changes …
[HTML][HTML] VitisNet:“Omics” integration through grapevine molecular networks
Background Genomic data release for the grapevine has increased exponentially in the last
five years. The Vitis vinifera genome has been sequenced and Vitis EST, transcriptomic …
five years. The Vitis vinifera genome has been sequenced and Vitis EST, transcriptomic …
[HTML][HTML] VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)
Background Gene expression datasets in model plants such as Arabidopsis have
contributed to our understanding of gene function and how a single underlying biological …
contributed to our understanding of gene function and how a single underlying biological …
[HTML][HTML] System-level and granger network analysis of integrated proteomic and metabolomic dynamics identifies key points of grape berry development at the …
L Wang, X Sun, J Weiszmann… - Frontiers in plant …, 2017 - frontiersin.org
Grapevine is a fruit crop with worldwide economic importance. The grape berry undergoes
complex biochemical changes from fruit set until ripening. This ripening process and …
complex biochemical changes from fruit set until ripening. This ripening process and …
Identification of putative stage-specific grapevine berry biomarkers and omics data integration into networks
A Zamboni, M Di Carli, F Guzzo, M Stocchero… - Plant …, 2010 - academic.oup.com
The analysis of grapevine (Vitis vinifera) berries at the transcriptomic, proteomic, and
metabolomic levels can provide great insight into the molecular events underlying berry …
metabolomic levels can provide great insight into the molecular events underlying berry …
Aggregated gene co-expression networks predict transcription factor regulatory landscapes in grapevine
L Orduña, A Santiago, D Navarro-Payá… - Journal of …, 2023 - academic.oup.com
Gene co-expression networks (GCNs) have not been extensively studied in non-model
plants. However, the rapid accumulation of transcriptome datasets in certain species …
plants. However, the rapid accumulation of transcriptome datasets in certain species …
[HTML][HTML] GC–MS metabolic profiling of Cabernet Sauvignon and Merlot cultivars during grapevine berry development and network analysis reveals a stage-and …
A Cuadros-Inostroza, S Ruíz-Lara, E González… - Metabolomics, 2016 - Springer
Abstract Information about the total chemical composition of primary metabolites during
grape berry development is scarce, as are comparative studies trying to understand to what …
grape berry development is scarce, as are comparative studies trying to understand to what …
[HTML][HTML] Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development
Background Grape berry development is a dynamic process that involves a complex series
of molecular genetic and biochemical changes divided into three major phases. During …
of molecular genetic and biochemical changes divided into three major phases. During …