Gene regulation by sense–antisense overlap of polyadenylation signals
R Gu, Z Zhang, JN DeCerbo, GG Carmichael - Rna, 2009 - rnajournal.cshlp.org
We show here that expression of genes from convergent transcription units can be regulated
by the formation of double-stranded RNA (dsRNA) in the region of overlapping …
by the formation of double-stranded RNA (dsRNA) in the region of overlapping …
How a small DNA virus uses dsRNA but not RNAi to regulate its life cycle
R Gu, Z Zhang, GG Carmichael - Cold Spring Harbor …, 2006 - symposium.cshlp.org
Mouse polyomavirus contains a circular DNA genome, with early and late genes transcribed
from opposite strands. At early times after infection, genes encoded from the early …
from opposite strands. At early times after infection, genes encoded from the early …
Mechanisms and consequences of alternative polyadenylation
DC Di Giammartino, K Nishida, JL Manley - Molecular cell, 2011 - cell.com
Alternative polyadenylation (APA) is emerging as a widespread mechanism used to control
gene expression. Like alternative splicing, usage of alternative poly (A) sites allows a single …
gene expression. Like alternative splicing, usage of alternative poly (A) sites allows a single …
Alternative polyadenylation of mammalian transcripts is generally deleterious, not adaptive
Alternative polyadenylation (APA) produces from the same gene multiple mature RNAs with
varying 3′ ends. Although APA is commonly believed to generate beneficial functional …
varying 3′ ends. Although APA is commonly believed to generate beneficial functional …
Alternative polyadenylation diversifies post‐transcriptional regulation by selective RNA–protein interactions
Recent research has uncovered extensive variability in the boundaries of transcript isoforms,
yet the functional consequences of this variation remain largely unexplored. Here, we …
yet the functional consequences of this variation remain largely unexplored. Here, we …
Alternative polyadenylation regulation: insights from sequential polyadenylation
P Tang, Y Zhou - Transcription, 2022 - Taylor & Francis
The processing of the proximal and distal poly (A) sites in alternative polyadenylation (APA)
has long been thought to independently occur on pre-mRNAs during transcription. However …
has long been thought to independently occur on pre-mRNAs during transcription. However …
Transcriptional activity regulates alternative cleavage and polyadenylation
Genes containing multiple pre‐mRNA cleavage and polyadenylation sites, or polyA sites,
express mRNA isoforms with variable 3′ untranslated regions (UTRs). By systematic …
express mRNA isoforms with variable 3′ untranslated regions (UTRs). By systematic …
[HTML][HTML] Ending the message: poly (A) signals then and now
NJ Proudfoot - Genes & development, 2011 - genesdev.cshlp.org
Abstract Polyadenylation [poly (A)] signals (PAS) are a defining feature of eukaryotic protein-
coding genes. The central sequence motif AAUAAA was identified in the mid-1970s and …
coding genes. The central sequence motif AAUAAA was identified in the mid-1970s and …
Tissue‐specific mechanisms of alternative polyadenylation: testis, brain, and beyond
CC MacDonald, KW McMahon - Wiley Interdisciplinary Reviews …, 2010 - Wiley Online Library
Changing the position of the poly (A) tail in an mRNA—alternative polyadenylation—is an
important mechanism to increase the diversity of gene expression, especially in metazoans …
important mechanism to increase the diversity of gene expression, especially in metazoans …
Splice site choice in a complex transcription unit containing multiple inefficient polyadenylation signals
Y Luo, GG Carmichael - Molecular and cellular biology, 1991 - Taylor & Francis
The relationship between polyadenylation and splicing was investigated in a model system
consisting of two tandem but nonidentical polyomavirus late transcription units. This model …
consisting of two tandem but nonidentical polyomavirus late transcription units. This model …