[HTML][HTML] TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models
Reference anatomies of the brain ('templates') and corresponding atlases are the foundation
for reporting standardized neuroimaging results. Currently, there is no registry of templates …
for reporting standardized neuroimaging results. Currently, there is no registry of templates …
[HTML][HTML] Visualizing anatomically registered data with brainrender
Three-dimensional (3D) digital brain atlases and high-throughput brain-wide imaging
techniques generate large multidimensional datasets that can be registered to a common …
techniques generate large multidimensional datasets that can be registered to a common …
[HTML][HTML] Marmoset Brain Mapping V3: Population multi-modal standard volumetric and surface-based templates
The standard anatomical brain template provides a common space and coordinate system
for visualizing and analyzing neuroimaging data from large cohorts of subjects. Previous …
for visualizing and analyzing neuroimaging data from large cohorts of subjects. Previous …
[HTML][HTML] Surface-based and probabilistic atlases of primate cerebral cortex
DC Van Essen, DL Dierker - Neuron, 2007 - cell.com
Brain atlases play an increasingly important role in neuroimaging, as they are invaluable for
analysis, visualization, and comparison of results across studies. For both humans and …
analysis, visualization, and comparison of results across studies. For both humans and …
[HTML][HTML] The Allen mouse brain common coordinate framework: a 3D reference atlas
Recent large-scale collaborations are generating major surveys of cell types and
connections in the mouse brain, collecting large amounts of data across modalities, spatial …
connections in the mouse brain, collecting large amounts of data across modalities, spatial …
[HTML][HTML] Neuromaps: structural and functional interpretation of brain maps
Imaging technologies are increasingly used to generate high-resolution reference maps of
brain structure and function. Comparing experimentally generated maps to these reference …
brain structure and function. Comparing experimentally generated maps to these reference …
[HTML][HTML] Waxholm Space atlas of the rat brain: A 3D atlas supporting data analysis and integration
Volumetric brain atlases are increasingly used to integrate and analyze diverse
experimental neuroscience data acquired from animal models, but until recently a publicly …
experimental neuroscience data acquired from animal models, but until recently a publicly …
BigBrain: an ultrahigh-resolution 3D human brain model
Reference brains are indispensable tools in human brain mapping, enabling integration of
multimodal data into an anatomically realistic standard space. Available reference brains …
multimodal data into an anatomically realistic standard space. Available reference brains …
[HTML][HTML] Digital atlasing and standardization in the mouse brain
M Hawrylycz, RA Baldock, A Burger… - PLoS computational …, 2011 - journals.plos.org
Digital brain atlases are used in neuroscience to characterize the spatial organization of
neuronal structures [1–3], for planning and guidance during neurosurgery [4, 5], and as a …
neuronal structures [1–3], for planning and guidance during neurosurgery [4, 5], and as a …
Atlas-based data integration for mapping the connections and architecture of the brain
TB Leergaard, JG Bjaalie - Science, 2022 - science.org
Detailed knowledge about the neural connections among regions of the brain is key for
advancing our understanding of normal brain function and changes that occur with aging …
advancing our understanding of normal brain function and changes that occur with aging …