lncRNAs in development and differentiation: from sequence motifs to functional characterization

F Constanty, A Shkumatava - Development, 2021 - journals.biologists.com
The number of long noncoding RNAs (lncRNAs) with characterized developmental and
cellular functions continues to increase, but our understanding of the molecular mechanisms …

LncRNAs in vertebrates: advances and challenges

AC Mallory, A Shkumatava - Biochimie, 2015 - Elsevier
Beyond the handful of classic and well-characterized long noncoding RNAs (lncRNAs),
more recently, hundreds of thousands of lncRNAs have been identified in multiple species …

Comparative transcriptomics analyses across species, organs, and developmental stages reveal functionally constrained lncRNAs

F Darbellay, A Necsulea - Molecular biology and evolution, 2020 - academic.oup.com
The functionality of long noncoding RNAs (lncRNAs) is disputed. In general, lncRNAs are
under weak selective pressures, suggesting that the majority of lncRNAs may be …

Long noncoding RNAs in organogenesis: making the difference

P Grote, BG Herrmann - Trends in Genetics, 2015 - cell.com
A large proportion of the cellular transcriptome of higher vertebrates consists of non-protein
coding transcripts, among them the long noncoding RNAs (lncRNAs). Although lncRNAs are …

The functions of long noncoding RNAs in development and stem cells

RBT Perry, I Ulitsky - Development, 2016 - journals.biologists.com
Eukaryotic genomes are pervasively transcribed, with tens of thousands of RNAs emanating
from uni-and bi-directional promoters and from active enhancers. In vertebrates, thousands …

Understanding the role of lncRNAs in nervous system development

BS Clark, S Blackshaw - Long Non Coding RNA Biology, 2017 - Springer
The diversity of lncRNAs has expanded within mammals in tandem with the evolution of
increased brain complexity, suggesting that lncRNAs play an integral role in this process. In …

Genomic and functional conservation of lncRNAs: lessons from flies

C Camilleri-Robles, R Amador, CC Klein, R Guigó… - Mammalian …, 2022 - Springer
Over the last decade, the increasing interest in long non-coding RNAs (lncRNAs) has led to
the discovery of these transcripts in multiple organisms. LncRNAs tend to be specifically …

Mechanisms of long noncoding RNA function in development and disease

SU Schmitz, P Grote, BG Herrmann - Cellular and molecular life sciences, 2016 - Springer
Since decades it has been known that non-protein-coding RNAs have important cellular
functions. Deep sequencing recently facilitated the discovery of thousands of novel …

Regulatory mechanisms of long noncoding RNAs in vertebrate central nervous system development and function

JL Knauss, T Sun - Neuroscience, 2013 - Elsevier
Long noncoding RNAs (lncRNAs) have emerged as an important class of molecules that
regulate gene expression at epigenetic, transcriptional, and post-transcriptional levels …

Long noncoding RNAs: from identification to functions and mechanisms

O Marín-Béjar, M Huarte - Advances in Genomics and Genetics, 2015 - Taylor & Francis
The complex universe of RNA transcribed by mammalian cells includes thousands of large
RNA molecules that do not encode for proteins. Despite their lack of coding capacity and …