Evolution of plant RNA polymerase IV/V genes: evidence of subneofunctionalization of duplicated NRPD2/NRPE2-like paralogs in Viola (Violaceae)

T Marcussen, B Oxelman, A Skog… - BMC Evolutionary …, 2010 - Springer
Background DNA-dependent RNA polymerase IV and V (Pol IV and V) are multi-subunit
enzymes occurring in plants. The origin of Pol V, specific to angiosperms, from Pol IV, which …

Evolutionary History of Plant Multisubunit RNA Polymerases IV and V Subunit Origins via Genome-Wide and Segmental Gene Duplications, Retrotransposition, and …

SL Tucker, J Reece, TS Ream… - Cold Spring Harbor …, 2010 - symposium.cshlp.org
Eukaryotes have three multisubunit DNA-dependent RNA polymerases that are essential for
viability, abbreviated as Pol I, Pol II, and Pol III. Remarkably, Arabidopsis thaliana and other …

Ancient origin and recent innovations of RNA polymerase IV and V

Y Huang, T Kendall, ES Forsythe… - Molecular biology …, 2015 - academic.oup.com
Small RNA-mediated chromatin modification is a conserved feature of eukaryotes. In
flowering plants, the short interfering (si) RNAs that direct transcriptional silencing are …

Step‐wise and lineage‐specific diversification of plant RNA polymerase genes and origin of the largest plant‐specific subunits

Y Wang, H Ma - New Phytologist, 2015 - Wiley Online Library
Proteins often function as complexes, yet little is known about the evolution of dissimilar
subunits of complexes. DNA‐directed RNA polymerases (RNAP s) are multisubunit …

Plant multisubunit RNA polymerases IV and V

TS Ream, JR Haag, CS Pikaard - Nucleic Acid Polymerases, 2014 - Springer
Plants are unique among eukaryotes in having five nuclear multisubunit RNA polymerases.
These include RNA polymerases I, II, and III (Pols I, II, and III), which are ubiquitous among …

Evidence for a unique DNA-dependent RNA polymerase in cereal crops

JT Trujillo, AS Seetharam, MB Hufford… - Molecular Biology …, 2018 - academic.oup.com
Gene duplication is an important driver for the evolution of new genes and protein functions.
Duplication of DNA-dependent RNA polymerase (Pol) II subunits within plants led to the …

Functional diversification of maize RNA polymerase IV and V subtypes via alternative catalytic subunits

JR Haag, B Brower-Toland, EK Krieger, L Sidorenko… - Cell reports, 2014 - cell.com
Unlike nuclear multisubunit RNA polymerases I, II, and III, whose subunit compositions are
conserved throughout eukaryotes, plant RNA polymerases IV and V are nonessential, Pol II …

[PDF][PDF] Functional consequences of subunit diversity in RNA polymerases II and V

EH Tan, T Blevins, TS Ream, CS Pikaard - Cell reports, 2012 - cell.com
Multisubunit RNA polymerases IV and V (Pol IV and Pol V) evolved as specialized forms of
Pol II that mediate RNA-directed DNA methylation (RdDM) and transcriptional silencing of …

Multifaceted roles of RNA polymerase IV in plant growth and development

S Zhang, XQ Wu, HT Xie, SS Zhao… - Journal of Experimental …, 2020 - academic.oup.com
Multifaceted roles of RNA polymerase IV in plant growth and development | Journal of
Experimental Botany | Oxford Academic Skip to Main Content Advertisement Oxford …

Non-coding RNA polymerases that silence transposable elements and reprogram gene expression in plants

B Rymen, L Ferrafiat, T Blevins - Transcription, 2020 - Taylor & Francis
Multisubunit RNA polymerase (Pol) complexes are the core machinery for gene expression
in eukaryotes. The enzymes Pol I, Pol II and Pol III transcribe distinct subsets of nuclear …