[HTML][HTML] Automated label-free quantification of metabolites from liquid chromatography–mass spectrometry data

E Kenar, H Franken, S Forcisi, K Wörmann… - Molecular & Cellular …, 2014 - ASBMB
Liquid chromatography coupled to mass spectrometry (LC-MS) has become a standard
technology in metabolomics. In particular, label-free quantification based on LC-MS is easily …

Algorithms and tools for the preprocessing of LC–MS metabolomics data

S Castillo, P Gopalacharyulu, L Yetukuri… - … and Intelligent Laboratory …, 2011 - Elsevier
Metabolomics encompasses the study of small molecules in a biological sample. Liquid
Chromatography coupled with Mass Spectrometry (LC–MS) profiling is an important …

[HTML][HTML] Annotation: a computational solution for streamlining metabolomics analysis

X Domingo-Almenara, JR Montenegro-Burke… - Analytical …, 2018 - ncbi.nlm.nih.gov
Metabolite identification is still considered an imposing bottleneck in liquid chromatography
mass spectrometry (LC/MS) untargeted metabolomics. The identification workflow usually …

MS-CleanR: A feature-filtering workflow for untargeted LC–MS based metabolomics

O Fraisier-Vannier, J Chervin, G Cabanac… - Analytical …, 2020 - ACS Publications
Untargeted metabolomics using liquid chromatography–mass spectrometry (LC–MS) is
currently the gold-standard technique to determine the full chemical diversity in biological …

[HTML][HTML] Processing methods for differential analysis of LC/MS profile data

M Katajamaa, M Orešič - BMC bioinformatics, 2005 - Springer
Background Liquid chromatography coupled to mass spectrometry (LC/MS) has been widely
used in proteomics and metabolomics research. In this context, the technology has been …

Metabolomic analysis and visualization engine for LC− MS data

E Melamud, L Vastag, JD Rabinowitz - Analytical chemistry, 2010 - ACS Publications
Metabolomic analysis by liquid chromatography− high-resolution mass spectrometry results
in data sets with thousands of features arising from metabolites, fragments, isotopes, and …

Recent advances in LC‐MS‐based metabolomics for clinical biomarker discovery

CJ Chen, DY Lee, J Yu, YN Lin… - Mass spectrometry …, 2023 - Wiley Online Library
The employment of liquid chromatography‐mass spectrometry (LC‐MS) untargeted and
targeted metabolomics has led to the discovery of novel biomarkers and improved the …

Metabolite annotation and identification

J Godzien, AG de la Fuente, A Otero… - Comprehensive analytical …, 2018 - Elsevier
Untargeted metabolomics has proven to be an excellent tool in biomarker discovery assays.
It avoids the need for a priori specific hypotheses and measures a large number of signals …

Enhanced detection and identification in metabolomics by use of LC–MS/MS untargeted analysis in combination with gas-phase fractionation

M Calderon-Santiago, F Priego-Capote… - Analytical …, 2014 - ACS Publications
Liquid chromatography coupled to tandem mass spectrometry is one of the most widely
used analytical platforms for profiling analysis in metabolomics. One weakness of …

Metabolite identification and quantitation in LC-MS/MS-based metabolomics

JF Xiao, B Zhou, HW Ressom - TrAC Trends in Analytical Chemistry, 2012 - Elsevier
Metabolomics aims at detection and quantitation of all metabolites in biological samples.
The presence of metabolites with a wide variety of physicochemical properties and different …