PRODeepSyn: predicting anticancer synergistic drug combinations by embedding cell lines with protein–protein interaction network
X Wang, H Zhu, Y Jiang, Y Li, C Tang… - Briefings in …, 2022 - academic.oup.com
Although drug combinations in cancer treatment appear to be a promising therapeutic
strategy with respect to monotherapy, it is arduous to discover new synergistic drug …
strategy with respect to monotherapy, it is arduous to discover new synergistic drug …
NEXGB: a network embedding framework for anticancer drug combination prediction
F Meng, F Li, JX Liu, J Shang, X Liu, Y Li - International Journal of …, 2022 - mdpi.com
Compared to single-drug therapy, drug combinations have shown great potential in cancer
treatment. Most of the current methods employ genomic data and chemical information to …
treatment. Most of the current methods employ genomic data and chemical information to …
GraphSynergy: a network-inspired deep learning model for anticancer drug combination prediction
Objective To develop an end-to-end deep learning framework based on a protein–protein
interaction (PPI) network to make synergistic anticancer drug combination predictions …
interaction (PPI) network to make synergistic anticancer drug combination predictions …
[HTML][HTML] Deep graph embedding for prioritizing synergistic anticancer drug combinations
Drug combinations are frequently used for the treatment of cancer patients in order to
increase efficacy, decrease adverse side effects, or overcome drug resistance. Given the …
increase efficacy, decrease adverse side effects, or overcome drug resistance. Given the …
DTSyn: a dual-transformer-based neural network to predict synergistic drug combinations
J Hu, J Gao, X Fang, Z Liu, F Wang… - Briefings in …, 2022 - academic.oup.com
Drug combination therapies are superior to monotherapy for cancer treatment in many ways.
Identifying novel drug combinations by screening is challenging for the wet-lab experiments …
Identifying novel drug combinations by screening is challenging for the wet-lab experiments …
AttenSyn: an attention-based deep graph neural network for anticancer synergistic drug combination prediction
Identifying synergistic drug combinations is fundamentally important to treat a variety of
complex diseases while avoiding severe adverse drug–drug interactions. Although several …
complex diseases while avoiding severe adverse drug–drug interactions. Although several …
MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores
Motivation Combination therapies have emerged as a treatment strategy for cancers to
reduce the probability of drug resistance and to improve outcomes. Large databases …
reduce the probability of drug resistance and to improve outcomes. Large databases …
A complete graph-based approach with multi-task learning for predicting synergistic drug combinations
Motivation Drug combination therapy shows significant advantages over monotherapy in
cancer treatment. Since the combinational space is difficult to be traversed experimentally …
cancer treatment. Since the combinational space is difficult to be traversed experimentally …
Predicting cell line-specific synergistic drug combinations through a relational graph convolutional network with attention mechanism
Identifying synergistic drug combinations (SDCs) is a great challenge due to the
combinatorial complexity and the fact that SDC is cell line specific. The existing …
combinatorial complexity and the fact that SDC is cell line specific. The existing …
SynPathy: Predicting drug synergy through drug-associated pathways using deep learning
YC Tang, A Gottlieb - Molecular Cancer Research, 2022 - AACR
Drug combination therapy has become a promising therapeutic strategy for cancer
treatment. While high-throughput drug combination screening is effective for identifying …
treatment. While high-throughput drug combination screening is effective for identifying …