LettuceDB: an integrated multi-omics database for cultivated lettuce

W Zhou, T Yang, L Zeng, J Chen, Y Wang, X Guo… - Database, 2024 - academic.oup.com
Crop genomics has advanced rapidly during the past decade, which generated a great
abundance of omics data from multi-omics studies. How to utilize the accumulating data …

[PDF][PDF] LettuceGDB: the community database for lettuce genetics and omics

Z Guo, B Li, J Du, F Shen, Y Zhao, Y Deng, Z Kuang… - Plant …, 2023 - cell.com
As a globally popular leafy vegetable and a representative plant of the Asteraceae family,
lettuce has great economic and academic significance. In the last decade, high-throughput …

[HTML][HTML] BoGDB: An integrative genomic database for Brassica oleracea L.

Y Wang, J Ji, Z Fang, L Yang, M Zhuang… - Frontiers in Plant …, 2022 - frontiersin.org
Brassica oleracea is an important species due to its high economic and nutritional value.
Moreover, it is an ideal model for studies of morphology and genome evolution. In the …

CeleryDB: a genomic database for celery

K Feng, XL Hou, MY Li, Q Jiang, ZS Xu, JX Liu… - Database, 2018 - academic.oup.com
Celery (Apium graveolens L.) is a plant belonging to the Apiaceae family, and a popular
vegetable worldwide because of its abundant nutrients and various medical functions …

[HTML][HTML] Multi-omics and computational biology in horticultural plants: From genotype to phenotype

S Mondal, H Song, L Zhang, Y Cao - Frontiers in Plant Science, 2022 - frontiersin.org
Horticultural plants complement our food requirements from major agronomic crops by
providing a vast range of bioactive compounds, vitamins, and minerals along with …

CARMO: a comprehensive annotation platform for functional exploration of rice multi‐omics data

J Wang, M Qi, J Liu, Y Zhang - The Plant Journal, 2015 - Wiley Online Library
High‐throughput technology is gradually becoming a powerful tool for routine research in
rice. Interpretation of biological significance from the huge amount of data is a critical but …

[HTML][HTML] Vegetable biology and breeding in the genomics era

H Li, X Yang, Y Shang, Z Zhang, S Huang - Science China Life Sciences, 2023 - Springer
Vegetable crops provide a rich source of essential nutrients for humanity and represent
critical economic values to global rural societies. However, genetic studies of vegetable …

[HTML][HTML] MDSi: Multi-omics Database for Setaria italica

X Li, S Hou, M Feng, R Xia, J Li, S Tang, Y Han, J Gao… - BMC Plant …, 2023 - Springer
Abstract Background Foxtail millet (Setaria italica) harbors the small diploid genome (~ 450
Mb) and shows the high inbreeding rate and close relationship to several major foods, feed …

MODMS: a multi-omics database for facilitating biological studies on alfalfa (Medicago sativa L.)

L Fang, T Liu, M Li, XM Dong, Y Han, C Xu… - Horticulture …, 2024 - academic.oup.com
Alfalfa (Medicago sativa L.) is a globally important forage crop. It also serves as a vegetable
and medicinal herb because of its excellent nutritional quality and significant economic …

Gramene: a growing plant comparative genomics resource

C Liang, P Jaiswal, C Hebbard, S Avraham… - Nucleic Acids …, 2007 - academic.oup.com
Abstract Gramene (www. gramene. org) is a curated resource for genetic, genomic and
comparative genomics data for the major crop species, including rice, maize, wheat and …