A novel method for detecting uniparental disomy from trio genotypes identifies a significant excess in children with developmental disorders

DA King, TW Fitzgerald, R Miller, N Canham… - Genome …, 2014 - genome.cshlp.org
Exome sequencing of parent-offspring trios is a popular strategy for identifying causative
genetic variants in children with rare diseases. This method owes its strength to the …

Interpreting the role of de novo protein-coding mutations in neuropsychiatric disease

J Gratten, PM Visscher, BJ Mowry, NR Wray - Nature genetics, 2013 - nature.com
Pedigree, linkage and association studies are consistent with heritable variation for complex
disease due to the segregation of genetic factors in families and in the population. In …

DECIPHER: web-based, community resource for clinical interpretation of rare variants in developmental disorders

GJ Swaminathan, E Bragin… - Human molecular …, 2012 - academic.oup.com
Patients with developmental disorders often harbour sub-microscopic deletions or
duplications that lead to a disruption of normal gene expression or perturbation in the copy …

[HTML][HTML] Reducing the exome search space for mendelian diseases using genetic linkage analysis of exome genotypes

KR Smith, CJ Bromhead, MS Hildebrand, AE Shearer… - Genome biology, 2011 - Springer
Many exome sequencing studies of Mendelian disorders fail to optimally exploit family
information. Classical genetic linkage analysis is an effective method for eliminating a large …

Identifying rare variants associated with complex traits via sequencing

B Li, DJ Liu, SM Leal - Current protocols in human genetics, 2013 - Wiley Online Library
Although genome‐wide association studies have been successful in detecting associations
with common variants, there is currently an increasing interest in identifying low‐frequency …

[HTML][HTML] New perspectives for the elucidation of genetic disorders

HH Ropers - The American Journal of Human Genetics, 2007 - cell.com
For almost 15 years, genome research has focused on the search for major risk factors in
common diseases, with disappointing results. Only recently, whole-genome association …

Inferring compound heterozygosity from large-scale exome sequencing data

MH Guo, LC Francioli, SL Stenton, JK Goodrich… - Nature …, 2024 - nature.com
Recessive diseases arise when both copies of a gene are impacted by a damaging genetic
variant. When a patient carries two potentially causal variants in a gene, accurate diagnosis …

Searching for genetic determinants in the new millennium

NJ Risch - Nature, 2000 - nature.com
Human genetics is now at a critical juncture. The molecular methods used successfully to
identify the genes underlying rare mendelian syndromes are failing to find the numerous …

The analysis of parental origin of alleles may detect susceptibility loci for complex disorders

AD Paterson, DMJ Naimark, A Petronis - Human heredity, 1999 - karger.com
The phenomenon of genomic imprinting describes the differential behavior of genes
depending on their parental origin, and has been demonstrated in a few rare genetic …

[HTML][HTML] Lessons learned from large-scale, first-tier clinical exome sequencing in a highly consanguineous population

D Monies, M Abouelhoda, M Assoum… - The American Journal of …, 2019 - cell.com
We report the results of clinical exome sequencing (CES) on> 2,200 previously unpublished
Saudi families as a first-tier test. The predominance of autosomal-recessive causes allowed …