Genome sequencing and comprehensive rare-variant analysis of 465 families with neurodevelopmental disorders

A Sanchis-Juan, K Megy, J Stephens… - The American Journal of …, 2023 - cell.com
Despite significant progress in unraveling the genetic causes of neurodevelopmental
disorders (NDDs), a substantial proportion of individuals with NDDs remain without a …

Revisiting Mendelian disorders through exome sequencing

CS Ku, N Naidoo, Y Pawitan - Human genetics, 2011 - Springer
Over the past several years, more focus has been placed on dissecting the genetic basis of
complex diseases and traits through genome-wide association studies. In contrast …

Exome sequencing as a tool for Mendelian disease gene discovery

MJ Bamshad, SB Ng, AW Bigham, HK Tabor… - Nature Reviews …, 2011 - nature.com
Exome sequencing—the targeted sequencing of the subset of the human genome that is
protein coding—is a powerful and cost-effective new tool for dissecting the genetic basis of …

Genome structural variation and sporadic disease traits

JR Lupski - Nature genetics, 2006 - nature.com
Many submicroscopic genomic rearrangements have been robustly associated with well-
defined clinical syndromes. Three papers in this issue once again illustrate how underlying …

[HTML][HTML] Identification of the genetic basis for complex disorders by use of pooling-based genomewide single-nucleotide–polymorphism association studies

JV Pearson, MJ Huentelman, RF Halperin… - The American Journal of …, 2007 - cell.com
We report the development and validation of experimental methods, study designs, and
analysis software for pooling-based genomewide association (GWA) studies that use high …

[HTML][HTML] Impact of diagnostic misclassification on estimation of genetic correlations using genome-wide genotypes

NR Wray, SH Lee, KS Kendler - European Journal of Human Genetics, 2012 - nature.com
Disorders that share genetic risk factors often are placed in closely related diagnostic
categories and treated similarly. Until recently, evidence for shared genetic etiology derived …

Deep sequencing reveals 50 novel genes for recessive cognitive disorders

H Najmabadi, H Hu, M Garshasbi, T Zemojtel… - Nature, 2011 - nature.com
Common diseases are often complex because they are genetically heterogeneous, with
many different genetic defects giving rise to clinically indistinguishable phenotypes. This has …

[HTML][HTML] Exome variant discrepancies due to reference-genome differences

H Li, M Dawood, MM Khayat, JR Farek… - The American Journal of …, 2021 - cell.com
Despite release of the GRCh38 human reference genome more than seven years ago,
GRCh37 remains more widely used by most research and clinical laboratories. To date, no …

[HTML][HTML] Disease and polygenic architecture: avoid trio design and appropriately account for unscreened control subjects for common disease

WJ Peyrot, DI Boomsma, BWJH Penninx… - The American Journal of …, 2016 - cell.com
Genome-wide association studies (GWASs) are an optimal design for discovery of disease
risk loci for diseases whose underlying genetic architecture includes many common causal …

[HTML][HTML] Sex-based analysis of de novo variants in neurodevelopmental disorders

TN Turner, AB Wilfert, TE Bakken, RA Bernier… - The American Journal of …, 2019 - cell.com
While genes with an excess of de novo mutations (DNMs) have been identified in children
with neurodevelopmental disorders (NDDs), few studies focus on DNM patterns where the …