Diversity and dynamics of DNA methylation: Epigenomic resources and tools for crop breeding

T Kawakatsu, JR Ecker - Breeding science, 2019 - jstage.jst.go.jp
DNA methylation is an epigenetic modification that can affect gene expression and
transposable element (TE) activities. Because cytosine DNA methylation patterns are …

Recent advances in DNA methylation and their potential breeding applications in plants

AA Shaikh, S Chachar, M Chachar, N Ahmed, C Guan… - Horticulturae, 2022 - mdpi.com
Traditional plant breeding encompasses repetitive crossing and selection based on
morphological traits, while phenotypic selection has been complemented by molecular …

[HTML][HTML] Crop epigenomics: identifying, unlocking, and harnessing cryptic variation in crop genomes

L Ji, DA Neumann, RJ Schmitz - Molecular plant, 2015 - cell.com
DNA methylation is a key chromatin modification in plant genomes that is meiotically and
mitotically heritable, and at times is associated with gene expression and morphological …

Induced methylation in plants as a crop improvement tool: progress and perspectives

C Mercé, PE Bayer, C Tay Fernandez, J Batley… - Agronomy, 2020 - mdpi.com
The methylation of gene promoters is an epigenetic process that can have a major impact on
plant phenotypes through its control of gene expression. This phenomenon can be observed …

Exploring and exploiting epigenetic variation in crops

GJ King, S Amoah, S Kurup - Genome, 2010 - cdnsciencepub.com
This review addresses the mechanisms by which epigenetic variation modulates plant gene
regulation and phenotype. In particular we explore the scope for harnessing such processes …

Exploring the crop epigenome: a comparison of DNA methylation profiling techniques

DR Agius, A Kapazoglou, E Avramidou… - Frontiers in Plant …, 2023 - frontiersin.org
Epigenetic modifications play a vital role in the preservation of genome integrity and in the
regulation of gene expression. DNA methylation, one of the key mechanisms of epigenetic …

Intertwined evolution of plant epigenomes and genomes

EJ Ritter, CE Niederhuth - Current Opinion in Plant Biology, 2021 - Elsevier
DNA methylation is found across eukaryotes; however, plants have evolved patterns and
pathways of DNA methylation that are distinct from animals and fungi. DNA methylation …

Will epigenetics be a key player in crop breeding?

K Tonosaki, R Fujimoto, ES Dennis, V Raboy… - Frontiers in plant …, 2022 - frontiersin.org
If food and feed production are to keep up with world demand in the face of climate change,
continued progress in understanding and utilizing both genetic and epigenetic sources of …

The causes and consequences of DNA methylome variation in plants

DK Seymour, C Becker - Current opinion in plant biology, 2017 - Elsevier
Highlights•Epigenetic variation in plants is frequently linked to genetic variation.•Single large
effect mutations perturb the epigenetic landscape in trans.•DNA methylation regulates …

Accessing epigenetic variation in the plant methylome

KD Kim, M El Baidouri… - Briefings in Functional …, 2014 - academic.oup.com
Cytosine DNA methylation is the addition of a methyl group to the 5′ position of a cytosine,
which plays a crucial role in plant development and gene silencing. Genome-wide profiling …