Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits

F Lutzoni, F Kauff, CJ Cox, D McLaughlin… - American journal of …, 2004 - Wiley Online Library
Based on an overview of progress in molecular systematics of the true fungi
(Fungi/Eumycota) since 1990, little overlap was found among single‐locus data matrices …

Research coordination networks: a phylogeny for kingdom Fungi (Deep Hypha)

M Blackwell, DS Hibbett, JW Taylor, JW Spatafora - Mycologia, 2006 - Taylor & Francis
Research in fungal phylogenetics and systematics progressed rapidly in the past decade
due to advances in DNA sequencing technologies and analytical methods. A newfound …

Fungal molecular evolution: gene trees and geologic time

ML Berbee, JW Taylor - Systematics and evolution, 2001 - Springer
Fungal phylogenetics has always been based on characters, but technological and
intellectual advances are introducing new kinds of characters and new ways of thinking …

The fungal tree of life: from molecular systematics to genome‐scale phylogenies

JW Spatafora, MC Aime, IV Grigoriev… - The fungal …, 2017 - Wiley Online Library
In 1996 the genome of Saccharomyces cerevisiae was published and marked the beginning
of a new era in fungal biology (1). Since then, rapid advancements in both sequencing …

Fungal species concepts in the genomics era

J Xu - Genome, 2020 - cdnsciencepub.com
The 140 000 or so fungal species reported so far are heterogeneously defined based on
varying criteria such as morphological, physiological, mating, and (or) molecular features …

What defines the “kingdom” fungi?

TA Richards, GUY Leonard… - The Fungal Kingdom, 2017 - Wiley Online Library
It is a certainty that the tree of life can be broken up into large units of biodiversity that span
such great evolutionary distances that one could call them kingdoms. However, if these units …

Assembling the fungal tree of life: constructing the structural and biochemical database

GJ Celio, M Padamsee, BTM Dentinger, R Bauer… - Mycologia, 2006 - Taylor & Francis
A major goal of the Assembling the Fungal Tree of Life project is to create a searchable
database< http://aftol. umn. edu> of selected ultrastructural and biochemical characters from …

The Fungi: 1, 2, 3… 5.1 million species?

M Blackwell - American journal of botany, 2011 - Wiley Online Library
• Premise of the study: Fungi are major decomposers in certain ecosystems and essential
associates of many organisms. They provide enzymes and drugs and serve as experimental …

The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

CL Schoch, GH Sung, F López-Giráldez… - Systematic …, 2009 - academic.oup.com
Abstract We present a 6-gene, 420-species maximum-likelihood phylogeny of Ascomycota,
the largest phylum of Fungi. This analysis is the most taxonomically complete to date with …

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

MA Naranjo‐Ortiz, T Gabaldón - Biological Reviews, 2019 - Wiley Online Library
The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes
characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities …