Plastid genome sequencing, comparative genomics, and phylogenomics: current status and prospects
L Gao, YJ SU, T Wang - Journal of Systematics and Evolution, 2010 - Wiley Online Library
More than 190 plastid genomes have been completely sequenced during the past two
decades due to advances in DNA sequencing technologies. Based on this unprecedented …
decades due to advances in DNA sequencing technologies. Based on this unprecedented …
Plastid phylogenomics and green plant phylogeny: almost full circle but not quite there
A study in BMC Evolutionary Biology represents the most comprehensive effort to clarify the
phylogeny of green plants using sequences from the plastid genome. This study highlights …
phylogeny of green plants using sequences from the plastid genome. This study highlights …
Plastid genome structure and phylogenomics of Nymphaeales: conserved gene order and new insights into relationships
The plastid genomes of early-diverging angiosperms were among the first land plant
plastomes investigated. Despite their importance to understanding angiosperm evolution, no …
plastomes investigated. Despite their importance to understanding angiosperm evolution, no …
Plastid genomes of seed plants
RK Jansen, TA Ruhlman - Genomics of chloroplasts and mitochondria, 2012 - Springer
The field of comparative plastid genomics has burgeoned during the past decade, largely
due to the availability of rapid, less expensive genome sequencing technologies. Currently …
due to the availability of rapid, less expensive genome sequencing technologies. Currently …
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
Background Molecular evolutionary studies share the common goal of elucidating historical
relationships, and the common challenge of adequately sampling taxa and characters …
relationships, and the common challenge of adequately sampling taxa and characters …
Phylogeny of plastids based on cladistic analysis of gene loss inferred from complete plastid genome sequences
H Nozaki, N Ohta, M Matsuzaki, O Misumi… - Journal of molecular …, 2003 - Springer
Based on the recent hypothesis on the origin of eukaryotic phototrophs, red algae, green
plants, and glaucophytes constitute the “primary photosynthetic eukaryotes”(whose plastids …
plants, and glaucophytes constitute the “primary photosynthetic eukaryotes”(whose plastids …
[HTML][HTML] Comparative analyses of 3,654 plastid genomes unravel insights into evolutionary dynamics and phylogenetic discordance of green plants
The plastid organelle is essential for many vital cellular processes and the growth and
development of plants. The availability of a large number of complete plastid genomes could …
development of plants. The availability of a large number of complete plastid genomes could …
Complete plastid genomes from Ophioglossum californicum, Psilotum nudum, and Equisetum hyemale reveal an ancestral land plant genome structure and resolve …
Background Plastid genome structure and content is remarkably conserved in land plants.
This widespread conservation has facilitated taxon-rich phylogenetic analyses that have …
This widespread conservation has facilitated taxon-rich phylogenetic analyses that have …
Sequencing angiosperm plastid genomes made easy: a complete set of universal primers and a case study on the phylogeny of Saxifragales
Plastid genomes are an invaluable resource for plant biological studies. However, the
number of completely sequenced plant plastid genomes is still small compared with the vast …
number of completely sequenced plant plastid genomes is still small compared with the vast …
Advances in phylogenomics based on complete chloroplast genomes
Z Yun-Jie, LI De-Zhu - Plant Diversity, 2011 - journal.kib.ac.cn
Phylogenomics is a new synthesized discipline which combines genomics with
phylogenetics. Phylogenomics based on chloroplast genomes has shown many great …
phylogenetics. Phylogenomics based on chloroplast genomes has shown many great …
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