AZTEC: A cloud-based computational platform to integrate biomedical resources

P Tan, Y Zhou, X Huang, GM Mazzeo… - 2017 IEEE 33rd …, 2017 - ieeexplore.ieee.org
Omics phenotyping has become increasingly recognizedin our path to Precision Medicine. A
major computationalchallenge of our investigator community is to identify the necessarydata …

Integrated biomedical data analysis utilizing various types of data for biomarkers identification

P Zhang, A Cox, A Cripps… - 2017 IEEE International …, 2017 - ieeexplore.ieee.org
Biomarkers discovery research requires the integrated analyses of a variety of the data
across multiple domains, including clinical data, pathology data, gene expression …

A cloud solution for multi-omics data integration

F Tordini - 2016 Intl IEEE Conferences on Ubiquitous …, 2016 - ieeexplore.ieee.org
Recent advances in molecular biology, Bioinformatics techniques have brought to an
explosion of the information about the spatial organisation of the DNA inside the nucleus. In …

Integration of multiple heterogeneous omics data

C Zhang, J Liu, Q Shi, X Yu, T Zeng… - 2016 IEEE International …, 2016 - ieeexplore.ieee.org
Integration of different genomic profiles is challenging to understand complex diseases in a
multi-view manner. Computational method is needed to preserve useful information of data …

Challenges of Large-Scale Biomedical Workflows on the Cloud--A Case Study on the Need for Reproducibility of Results

S Kanwal, A Lonie, RO Sinnott… - 2015 IEEE 28th …, 2015 - ieeexplore.ieee.org
Computational bioinformatics workflows are extensively used to analyse genomics data.
With the unprecedented advancements in genomic sequence technology and opportunities …

Federated galaxy: Biomedical computing at the frontier

E Afgan, V Jalili, N Goonasekera… - 2018 IEEE 11th …, 2018 - ieeexplore.ieee.org
Biomedical data exploration requires integrative analyses of large datasets using a diverse
ecosystem of tools. For more than a decade, the Galaxy project (https://galaxyproject. org) …

Federated clouds for biomedical research: Integrating OpenStack for ICTBioMed

C Mazurek, J Pukacki, M Kosiedowski… - 2014 IEEE 3rd …, 2014 - ieeexplore.ieee.org
Increasingly complex biomedical data from diverse sources demands large storage, efficient
software and high performance computing for the data's computationally intensive analysis …

Parallel and cloud-based analysis of omics data: Modelling and simulation in medicine

G Agapito, B Calabrese, PH Guzzi… - 2017 25th Euromicro …, 2017 - ieeexplore.ieee.org
High throughput experimental platforms and diagnostic equipments available in clinical
settings and in research laboratories, such as magnetic resonance imaging, microarray …

Toward a systems biology software toolkit

DJ Johann, MD McGuigan, S Tomov… - … IEEE Symposium on …, 2004 - ieeexplore.ieee.org
Insight to complex problems may be revealed when domain data sets are viewed or
structured in new and innovative ways. Systems approaches to biomedical problems …

BioExtract Server, a Web-based workflow enabling system, leveraging iPlant collaborative resources

CM Lushbough, E Gnimpieba… - 2013 IEEE International …, 2013 - ieeexplore.ieee.org
In order to handle the vast quantities of biological data generated by high-throughput
experimental technologies, the BioExtract Server (bioextract. org) has leveraged iPlant …