Digital genotyping of sorghum–a diverse plant species with a large repeat-rich genome
DT Morishige, PE Klein, JL Hilley, SME Sahraeian… - Bmc Genomics, 2013 - Springer
Background Rapid acquisition of accurate genotyping information is essential for all genetic
marker-based studies. For species with relatively small genomes, complete genome …
marker-based studies. For species with relatively small genomes, complete genome …
Construction of a high-density genetic map using specific-locus amplified fragments in sorghum
G Ji, Q Zhang, R Du, P Lv, X Ma, S Fan, S Li, S Hou… - BMC genomics, 2017 - Springer
Background Sorghum is mainly used as a human food and beverage source, playing an
important role in the production of ethanol and other bio-industrial products. Thus it is …
important role in the production of ethanol and other bio-industrial products. Thus it is …
Genotyping by Sequencing of 393 Sorghum bicolor BTx623 × IS3620C Recombinant Inbred Lines Improves Sensitivity and Resolution of QTL Detection
We describe a genetic map with a total of 381 bins of 616 genotyping by sequencing (GBS)-
based SNP markers in a F6-F8 recombinant inbred line (RIL) population of 393 individuals …
based SNP markers in a F6-F8 recombinant inbred line (RIL) population of 393 individuals …
Sorghum Association Panel whole‐genome sequencing establishes cornerstone resource for dissecting genomic diversity
Association mapping panels represent foundational resources for understanding the genetic
basis of phenotypic diversity and serve to advance plant breeding by exploring genetic …
basis of phenotypic diversity and serve to advance plant breeding by exploring genetic …
High‐throughput genomics in sorghum: from whole‐genome resequencing to a SNP screening array
WA Bekele, S Wieckhorst, W Friedt… - Plant Biotechnology …, 2013 - Wiley Online Library
With its small, diploid and completely sequenced genome, sorghum (S orghum bicolor L. M
oench) is highly amenable to genomics‐based breeding approaches. Here, we describe the …
oench) is highly amenable to genomics‐based breeding approaches. Here, we describe the …
Recent advancements in the breeding of sorghum crop: current status and future strategies for marker-assisted breeding
Sorghum is emerging as a model crop for functional genetics and genomics of tropical
grasses with abundant uses, including food, feed, and fuel, among others. It is currently the …
grasses with abundant uses, including food, feed, and fuel, among others. It is currently the …
In silico mapping of important genes and markers available in the public domain for efficient sorghum breeding
P Ramu, SP Deshpande, S Senthilvel, B Jayashree… - Molecular …, 2010 - Springer
Crop genome sequencing projects generate massive amounts of genomic sequence
information, and the utilization of this information in applied crop improvement programs has …
information, and the utilization of this information in applied crop improvement programs has …
A consensus genetic map of sorghum that integrates multiple component maps and high-throughput Diversity Array Technology (DArT) markers
Background Sorghum genome mapping based on DNA markers began in the early 1990s
and numerous genetic linkage maps of sorghum have been published in the last decade …
and numerous genetic linkage maps of sorghum have been published in the last decade …
Exploring the sorghum race level diversity utilizing 272 sorghum accessions genomic resources
Due to evolutionary divergence, sorghum race populations exhibit significant genetic and
morphological variation. A k-mer-based sorghum race sequence comparison identified the …
morphological variation. A k-mer-based sorghum race sequence comparison identified the …
DArT markers: diversity analyses and mapping in Sorghum bicolor
Background The sequential nature of gel-based marker systems entails low throughput and
high costs per assay. Commonly used marker systems such as SSR and SNP are also …
high costs per assay. Commonly used marker systems such as SSR and SNP are also …