[PDF][PDF] Bayesian models for variable selection that incorporate biological information
Variable selection has been the focus of much research in recent years. Bayesian methods
have found many successful applications, particularly in situations where the amount of …
have found many successful applications, particularly in situations where the amount of …
Gene selection: a Bayesian variable selection approach
Selection of significant genes via expression patterns is an important problem in microarray
experiments. Owing to small sample size and the large number of variables (genes), the …
experiments. Owing to small sample size and the large number of variables (genes), the …
Bayesian approaches to variable selection: a comparative study from practical perspectives
Z Lu, W Lou - The International Journal of Biostatistics, 2022 - degruyter.com
In many clinical studies, researchers are interested in parsimonious models that
simultaneously achieve consistent variable selection and optimal prediction. The resulting …
simultaneously achieve consistent variable selection and optimal prediction. The resulting …
Hierarchical Bayesian formulations for selecting variables in regression models
The objective of finding a parsimonious representation of the observed data by a statistical
model that is also capable of accurate prediction is commonplace in all domains of statistical …
model that is also capable of accurate prediction is commonplace in all domains of statistical …
MCMC algorithms for Bayesian variable selection in the logistic regression model for large-scale genomic applications
M Zucknick, S Richardson - arXiv preprint arXiv:1402.2713, 2014 - arxiv.org
In large-scale genomic applications vast numbers of molecular features are scanned in
order to find a small number of candidates which are linked to a particular disease or …
order to find a small number of candidates which are linked to a particular disease or …
Extended Bayesian information criteria for model selection with large model spaces
J Chen, Z Chen - Biometrika, 2008 - academic.oup.com
The ordinary Bayesian information criterion is too liberal for model selection when the model
space is large. In this paper, we re-examine the Bayesian paradigm for model selection and …
space is large. In this paper, we re-examine the Bayesian paradigm for model selection and …
Survival prediction and variable selection with simultaneous shrinkage and grouping priors
The presented work is motivated by the need of reliably estimating and predicting the
survival rates for individuals diagnosed with cancer, when gene expression profiles are …
survival rates for individuals diagnosed with cancer, when gene expression profiles are …
Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology
SM Hill, RM Neve, N Bayani, WL Kuo, S Ziyad… - BMC …, 2012 - Springer
Background An important question in the analysis of biochemical data is that of identifying
subsets of molecular variables that may jointly influence a biological response. Statistical …
subsets of molecular variables that may jointly influence a biological response. Statistical …
[HTML][HTML] Bayesian variable selection for survival data using inverse moment priors
A Nikooienejad, W Wang… - The annals of applied …, 2020 - ncbi.nlm.nih.gov
Efficient variable selection in high dimensional cancer genomic studies is critical for
discovering genes associated with specific cancer types and for predicting response to …
discovering genes associated with specific cancer types and for predicting response to …
Bayesian ranking and selection methods using hierarchical mixture models in microarray studies
The main purpose of microarray studies is screening to identify differentially expressed
genes as candidates for further investigation. Because of limited resources in this stage …
genes as candidates for further investigation. Because of limited resources in this stage …