[PDF][PDF] Bayesian models for variable selection that incorporate biological information

M Vannucci, FC Stingo, C Berzuini - Bayesian Statistics, 2010 - researchgate.net
Variable selection has been the focus of much research in recent years. Bayesian methods
have found many successful applications, particularly in situations where the amount of …

Gene selection: a Bayesian variable selection approach

KE Lee, N Sha, ER Dougherty, M Vannucci… - …, 2003 - academic.oup.com
Selection of significant genes via expression patterns is an important problem in microarray
experiments. Owing to small sample size and the large number of variables (genes), the …

Bayesian approaches to variable selection: a comparative study from practical perspectives

Z Lu, W Lou - The International Journal of Biostatistics, 2022 - degruyter.com
In many clinical studies, researchers are interested in parsimonious models that
simultaneously achieve consistent variable selection and optimal prediction. The resulting …

Hierarchical Bayesian formulations for selecting variables in regression models

V Rockova, E Lesaffre, J Luime… - Statistics in …, 2012 - Wiley Online Library
The objective of finding a parsimonious representation of the observed data by a statistical
model that is also capable of accurate prediction is commonplace in all domains of statistical …

MCMC algorithms for Bayesian variable selection in the logistic regression model for large-scale genomic applications

M Zucknick, S Richardson - arXiv preprint arXiv:1402.2713, 2014 - arxiv.org
In large-scale genomic applications vast numbers of molecular features are scanned in
order to find a small number of candidates which are linked to a particular disease or …

Extended Bayesian information criteria for model selection with large model spaces

J Chen, Z Chen - Biometrika, 2008 - academic.oup.com
The ordinary Bayesian information criterion is too liberal for model selection when the model
space is large. In this paper, we re-examine the Bayesian paradigm for model selection and …

Survival prediction and variable selection with simultaneous shrinkage and grouping priors

KH Lee, S Chakraborty, J Sun - Statistical Analysis and Data …, 2015 - Wiley Online Library
The presented work is motivated by the need of reliably estimating and predicting the
survival rates for individuals diagnosed with cancer, when gene expression profiles are …

Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology

SM Hill, RM Neve, N Bayani, WL Kuo, S Ziyad… - BMC …, 2012 - Springer
Background An important question in the analysis of biochemical data is that of identifying
subsets of molecular variables that may jointly influence a biological response. Statistical …

[HTML][HTML] Bayesian variable selection for survival data using inverse moment priors

A Nikooienejad, W Wang… - The annals of applied …, 2020 - ncbi.nlm.nih.gov
Efficient variable selection in high dimensional cancer genomic studies is critical for
discovering genes associated with specific cancer types and for predicting response to …

Bayesian ranking and selection methods using hierarchical mixture models in microarray studies

H Noma, S Matsui, T Omori, T Sato - Biostatistics, 2010 - academic.oup.com
The main purpose of microarray studies is screening to identify differentially expressed
genes as candidates for further investigation. Because of limited resources in this stage …