Multiple activities of RNA-binding proteins S1 and Hfq
E Hajnsdorf, IV Boni - Biochimie, 2012 - Elsevier
In all organisms, RNA-binding proteins participate in modulating all the steps in the life cycle
of RNA, including transcription, folding, translation and turnover. In bacteria, RNA-binding …
of RNA, including transcription, folding, translation and turnover. In bacteria, RNA-binding …
Structure and RNA-binding properties of the bacterial LSm protein Hfq
E Sauer - RNA biology, 2013 - Taylor & Francis
Over the past years, small non-coding RNAs (sRNAs) emerged as important modulators of
gene expression in bacteria. Guided by partial sequence complementarity, these sRNAs …
gene expression in bacteria. Guided by partial sequence complementarity, these sRNAs …
Arginine patch predicts the RNA annealing activity of Hfq from Gram-negative and Gram-positive bacteria
A Zheng, S Panja, SA Woodson - Journal of molecular biology, 2016 - Elsevier
Abstract The Sm-protein Hfq facilitates interactions between small non-coding RNA (sRNA)
and target mRNAs. In enteric Gram-negative bacteria, Hfq is required for sRNA regulation …
and target mRNAs. In enteric Gram-negative bacteria, Hfq is required for sRNA regulation …
Cycling of RNAs on hfq
EGH Wagner - RNA biology, 2013 - Taylor & Francis
The RNA chaperone Hfq is a key player in small RNA (sRNA)-mediated regulation of target
mRNAs in many bacteria. The absence of this protein causes pleiotropic phenotypes such …
mRNAs in many bacteria. The absence of this protein causes pleiotropic phenotypes such …
Lack of interchangeability of Hfq-like proteins
Hfq is an RNA-binding protein that participates in the regulatory activity of small non-coding
RNAs (sRNAs) in many species of bacteria. Hfq protein was first crystallized from …
RNAs (sRNAs) in many species of bacteria. Hfq protein was first crystallized from …
Identifying and characterizing Hfq–RNA interactions
MA Faner, AL Feig - Methods, 2013 - Elsevier
To regulate stress responses and virulence, bacteria use small regulatory RNAs (sRNAs).
These RNAs can up or down regulate target mRNAs through base pairing by influencing …
These RNAs can up or down regulate target mRNAs through base pairing by influencing …
The bacterial protein Hfq: much more than a mere RNA-binding factor
P Sobrero, C Valverde - Critical reviews in microbiology, 2012 - Taylor & Francis
Most of the sequenced bacterial genomes contain a gene encoding a protein known as Hfq
that resembles the eukaryotic RNA-binding proteins of the LSm family. It was originally …
that resembles the eukaryotic RNA-binding proteins of the LSm family. It was originally …
RNAs actively cycle on the Sm-like protein Hfq
A Fender, J Elf, K Hampel, B Zimmermann… - Genes & …, 2010 - genesdev.cshlp.org
Hfq, a protein required for small RNA (sRNA)-mediated regulation in bacteria, binds RNA
with low-nanomolar Kd values and long half-lives of complexes (> 100 min). This cannot be …
with low-nanomolar Kd values and long half-lives of complexes (> 100 min). This cannot be …
Structural basis for RNA 3′-end recognition by Hfq
E Sauer, O Weichenrieder - Proceedings of the National …, 2011 - National Acad Sciences
The homohexameric (L) Sm protein Hfq is a central mediator of small RNA-based gene
regulation in bacteria. Hfq recognizes small regulatory RNAs (sRNAs) specifically, despite …
regulation in bacteria. Hfq recognizes small regulatory RNAs (sRNAs) specifically, despite …
New aspects of RNA-based regulation by Hfq and its partner sRNAs
K Kavita, F de Mets, S Gottesman - Current opinion in microbiology, 2018 - Elsevier
Highlights•Novel cross-linking and sequencing methods uncover new sRNAs and sRNA
networks.•Many sRNAs are encoded within the 3′ and 5′ UTRs of mRNA as well as …
networks.•Many sRNAs are encoded within the 3′ and 5′ UTRs of mRNA as well as …