Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen

L Faino, MF Seidl, X Shi-Kunne, M Pauper… - Genome …, 2016 - genome.cshlp.org
Genomic plasticity enables adaptation to changing environments, which is especially
relevant for pathogens that engage in “arms races” with their hosts. In many pathogens …

Jumping genes and epigenetics: towards new species

R Rebollo, B Horard, B Hubert, C Vieira - Gene, 2010 - Elsevier
Transposable elements (TEs) are responsible for rapid genome remodelling by the creation
of new regulatory gene networks and chromosome restructuring. TEs are often regulated by …

Differential retention of transposable element-derived sequences in outcrossing Arabidopsis genomes

S Legrand, T Caron, F Maumus, S Schvartzman… - bioRxiv, 2018 - biorxiv.org
Transposable elements (TEs) have initially been viewed as pure genomic parasites but are
now recognized as central genome architects and powerful agents of rapid adaptation. A …

The epigenetic control of the transposable element life cycle in plant genomes and beyond

P Liu, D Cuerda-Gil, S Shahid… - Annual Review of …, 2022 - annualreviews.org
Within the life cycle of a living organism, another life cycle exists for the selfish genome
inhabitants, which are called transposable elements (TEs). These mobile sequences invade …

A field guide to eukaryotic transposable elements

JN Wells, C Feschotte - Annual review of genetics, 2020 - annualreviews.org
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …

Tracking the genome-wide outcomes of a transposable element burst over decades of amplification

L Lu, J Chen, SMC Robb, Y Okumoto… - Proceedings of the …, 2017 - National Acad Sciences
To understand the success strategies of transposable elements (TEs) that attain high copy
numbers, we analyzed two pairs of rice (Oryza sativa) strains, EG4/HEG4 and A119/A123 …

Differential retention of transposable element-derived sequences in outcrossing Arabidopsis genomes

S Legrand, T Caron, F Maumus, S Schvartzman… - Mobile DNA, 2019 - Springer
Abstract Background Transposable elements (TEs) are genomic parasites with major
impacts on host genome architecture and host adaptation. A proper evaluation of their …

[HTML][HTML] Ongoing endeavors to detect mobilization of transposable elements

Y Lee, U Ha, S Moon - BMB reports, 2022 - ncbi.nlm.nih.gov
Transposable elements (TEs) are DNA sequences capable of mobilization from one location
to another in the genome. Since the discovery of 'Dissociation (Dc) locus' by Barbara …

On the importance to acknowledge transposable elements in epigenomic analyses

E Lerat, J Casacuberta, C Chaparro, C Vieira - Genes, 2019 - mdpi.com
Eukaryotic genomes comprise a large proportion of repeated sequences, an important
fraction of which are transposable elements (TEs). TEs are mobile elements that have a …

Phylogenetic and genomic analyses resolve the origin of important plant genes derived from transposable elements

Z Joly-Lopez, DR Hoen, M Blanchette… - Molecular Biology and …, 2016 - academic.oup.com
Once perceived as merely selfish, transposable elements (TEs) are now recognized as
potent agents of adaptation. One way TEs contribute to evolution is through TE exaptation, a …