Synthesis and duplex-forming ability of oligonucleotides containing 4′-carboxythymidine analogs

Y Hari, T Osawa, S Obika - Organic & biomolecular chemistry, 2012 - pubs.rsc.org
Oligonucleotides containing 4′-carboxy-, 4′-methoxycarbonyl-, 4′-carbamoyl-, and 4′-
methylcarbamoyl-thymidines, and their 2′-methoxy, 2′-amino or 2′-acetamido analogs …

Synthesis of 2′-C,4′-C-Methyleneoxy-Bridged Thymidine Derivatives and Properties of Modified Oligonucleotides

T Osawa, H Kim, M Shoji, M Saijo, M Dohi… - The Journal of …, 2019 - ACS Publications
2′, 4′-Bridged nucleic acid (2′, 4′-BNA) analogues are used for therapeutic
oligonucleotides, owing to their excellent hybridizing ability with complementary RNA and …

Novel 2′-deoxycytidine analogues as pH independent substitutes of protonated cytosines in triple helix forming oligonucleotides

E Bédu, R Benhida, M Devys, JL Fourrey - Tetrahedron letters, 1999 - Elsevier
The N-acetyl derivatives 1a and 2a of the aminotriazole and aminoimidazole 2′-
deoxynucleosides 1 and 2 were synthesized as potential substitutes of protonated 2 …

Oligonucleotides containing 4′-C-aminomethyl-2′-modified thymidines show increased binding affinity towards DNA and RNA

HM Pfundheller, J Wengel - Bioorganic & medicinal chemistry letters, 1999 - Elsevier
Oligonucleotides containing 4′-C-aminomethyl-2′-O-methyl or 4′-C-aminomethyl-2′-
deoxy-2′-fluoro modified thymidines have been synthesized. Compared with the …

Nucleic acid secondary structures containing the double-headed nucleoside 5′(S)-C-(2-(thymin-1-yl) ethyl) thymidine

C Andersen, PK Sharma, MS Christensen… - Organic & …, 2008 - pubs.rsc.org
Oligodeoxynucleotides containing the double-headed nucleoside 5′(S)-C-(2-(thymin-1-yl)
ethyl) thymidine were prepared by standard solid phase synthesis. The synthetic building …

Oligonucleotides Containing Novel 4′‐C‐ or 3′‐C‐(Aminoalkyl)‐Branched Thymidines

HM Pfundheller, T Bryld, CE Olsen… - Helvetica Chimica …, 2000 - Wiley Online Library
The synthesis of four novel 3′‐C‐branched and 4′‐C‐branched nucleosides and their
transformation into the corresponding 3′‐O‐phosphoramidite building blocks for …

Synthesis and properties of oligonucleotides containing aminodeoxythymidine units

SM Gryaznov, RL Letsinger - Nucleic acids research, 1992 - academic.oup.com
Procedures are described for synthesis via solid support methodology of oligonucleotide
analogues derived in part from 3′-amino-3′-deoxythymidine or 5′-amino-5 …

Stability and structural features of the duplexes containing nucleoside analogues with a fixed N-type conformation, 2′-O, 4′-C-methyleneribonucleosides

S Obika, D Nanbu, Y Hari, J Andoh, K Morio, T Doi… - Tetrahedron letters, 1998 - Elsevier
Bicyclic nucleoside analogues with a fixed N-type conformation, 2′-O, 4′-C-
methyleneuridine and-cytidine, were incorporated into oligonucleotides, and the binding …

Synthesis and hybridization properties of β-and α-oligodeoxynucleotides containing β-and α-1-(3-C-allyl-2-deoxy-D-erythro-pentofuranosyl) thymine and α-1-[3-C-(3 …

PN Jørgensen, US Sørensen, HM Pfundheller… - Journal of the …, 1997 - pubs.rsc.org
Convergent synthesis of β-and α-1-(3-C-allyl-2-deoxy-D-erythro-pentofuranosyl) thymine
and their incorporation into β-and α-oligodeoxynucleotides (ODNs) is described. The …

Synthesis and properties of thymidines with six-membered amide bridge

Y Hari, T Osawa, Y Kotobuki, A Yahara… - Bioorganic & medicinal …, 2013 - Elsevier
Artificial thymidine monomers possessing amide or N-methylamide bridges were designed,
synthesized, and introduced into oligonucleotides. UV-melting experiments showed that …