Comparison of peak‐picking workflows for untargeted liquid chromatography/high‐resolution mass spectrometry metabolomics data analysis
RATIONALE Data analysis is a key step in mass spectrometry based untargeted
metabolomics, starting with the generation of generic peak lists from raw liquid …
metabolomics, starting with the generation of generic peak lists from raw liquid …
Advanced analytical and informatic strategies for metabolite annotation in untargeted metabolomics
Liquid chromatography–mass spectrometry (LC–MS)-based untargeted metabolomics is
constantly challenged by large-scale and unambiguous metabolite annotation in complex …
constantly challenged by large-scale and unambiguous metabolite annotation in complex …
Chemical derivatization in LC-MS-based metabolomics study
Because of great diversity of chemical and physical properties and wide ranges of
concentrations of different metabolites in metabolome samples, metabolome analysis is a …
concentrations of different metabolites in metabolome samples, metabolome analysis is a …
Navigating freely-available software tools for metabolomics analysis
Introduction The field of metabolomics has expanded greatly over the past two decades,
both as an experimental science with applications in many areas, as well as in regards to …
both as an experimental science with applications in many areas, as well as in regards to …
From mass to metabolite in human untargeted metabolomics: Recent advances in annotation of metabolites applying liquid chromatography-mass spectrometry data
WJ Nash, WB Dunn - TrAC Trends in Analytical Chemistry, 2019 - Elsevier
The relatively unbiased study of metabolites in biological systems is called untargeted
metabolomics and the application of liquid chromatography-mass spectrometry platforms for …
metabolomics and the application of liquid chromatography-mass spectrometry platforms for …
Mass spectral similarity for untargeted metabolomics data analysis of complex mixtures
While in nucleotide sequencing, the analysis of DNA from complex mixtures of organisms is
common, this is not yet true for mass spectrometric data analysis of complex mixtures. The …
common, this is not yet true for mass spectrometric data analysis of complex mixtures. The …
Metabolite measurement: pitfalls to avoid and practices to follow
Metabolites are the small biological molecules involved in energy conversion and
biosynthesis. Studying metabolism is inherently challenging due to metabolites' reactivity …
biosynthesis. Studying metabolism is inherently challenging due to metabolites' reactivity …
Challenges, progress and promises of metabolite annotation for LC–MS-based metabolomics
R Chaleckis, I Meister, P Zhang… - Current opinion in …, 2019 - Elsevier
Highlights•Data independent MS/MS acquisition methods improve metabolite
identification.•A step-by-step workflow is needed to assess the accuracy of metabolite …
identification.•A step-by-step workflow is needed to assess the accuracy of metabolite …
Updates in metabolomics tools and resources: 2014–2015
BB Misra, JJJ van der Hooft - Electrophoresis, 2016 - Wiley Online Library
Data processing and interpretation represent the most challenging and time‐consuming
steps in high‐throughput metabolomic experiments, regardless of the analytical platforms …
steps in high‐throughput metabolomic experiments, regardless of the analytical platforms …
Software tools and approaches for compound identification of LC-MS/MS data in metabolomics
The annotation of small molecules remains a major challenge in untargeted mass
spectrometry-based metabolomics. We here critically discuss structured elucidation …
spectrometry-based metabolomics. We here critically discuss structured elucidation …