Prebiotic catalytic peptide ligation yields proteinogenic peptides by intramolecular amide catalyzed hydrolysis facilitating regioselective lysine ligation in neutral water

J Singh, D Whitaker, B Thoma, S Islam… - Journal of the …, 2022 - ACS Publications
The prebiotic origin of catalyst-controlled peptide synthesis is fundamental to understanding
the emergence of life. Building on our recent discovery that thiols catalyze the ligation of …

Selective synthesis of lysine peptides and the prebiotically plausible synthesis of catalytically active diaminopropionic acid peptide nitriles in water

B Thoma, MW Powner - Journal of the American Chemical Society, 2023 - ACS Publications
Why life encodes specific proteinogenic amino acids remains an unsolved problem, but a
non-enzymatic synthesis that recapitulates biology's universal strategy of stepwise N-to-C …

Prebiotic synthesis of cysteine peptides that catalyze peptide ligation in neutral water

CS Foden, S Islam, C Fernández-García, L Maugeri… - Science, 2020 - science.org
Peptide biosynthesis is performed by ribosomes and several other classes of enzymes, but a
simple chemical synthesis may have created the first peptides at the origins of life. α …

Site-selective peptide bond hydrolysis and ligation in water by short peptide-based assemblies

A Singh, J Chakraborty, S Pal, D Das - Proceedings of the National …, 2024 - pnas.org
The evolution of complex chemical inventory from Darwin's nutrient-rich warm pond
necessitated rudimentary yet efficient catalytic folds. Short peptides and their self-organized …

Iterative design of a biomimetic catalyst for amino acid thioester condensation

H Wu, Handoko, M Raj, PS Arora - Organic letters, 2017 - ACS Publications
Herein, the design of a catalyst that combines lessons learned from peptide biosynthesis,
enzymes, and organocatalysts is described. The catalyst features a urea scaffold for …

Versatile peptide C-terminal functionalization via a computationally engineered peptide amidase

B Wu, HJ Wijma, L Song, HJ Rozeboom, C Poloni… - ACS …, 2016 - ACS Publications
The properties of synthetic peptides, including potency, stability, and bioavailability, are
strongly influenced by modification of the peptide chain termini. Unfortunately, generally …

Glutamic acid selective chemical cleavage of peptide bonds

JM Nalbone, N Lahankar, L Buissereth, M Raj - Organic letters, 2016 - ACS Publications
Site-specific hydrolysis of peptide bonds at glutamic acid under neutral aqueous conditions
is reported. The method relies on the activation of the backbone amide chain at glutamic …

Amide-forming chemical ligation via O-acyl hydroxamic acids

DL Dunkelmann, Y Hirata, KA Totaro… - Proceedings of the …, 2018 - National Acad Sciences
The facile rearrangement of “S-acyl isopeptides” to native peptide bonds via S, N-acyl shift is
central to the success of native chemical ligation, the widely used approach for protein total …

Native Peptide Cyclization, Sequential Chemoselective Amidation in Water

H Chen, Q Zhang - Journal of the American Chemical Society, 2023 - ACS Publications
Chemical synthesis offers robust tactics for structural alterations of peptides and proteins. It
remains a labor-intensive and complex process due to the challenges in selectively …

pH-Dependent peptide bond formation by the selective coupling of α-amino acids in water

LF Wu, Z Liu, JD Sutherland - Chemical Communications, 2021 - pubs.rsc.org
A novel mechanism enabling selective peptide elongation by coupling α-amino acids over
other potentially competing prebiotic amines under acidic aqueous condition is suggested. It …