In-silico clearing approach for deep refractive index tomography by partial reconstruction and wave-backpropagation
O Yasuhiko, K Takeuchi - Light: Science & Applications, 2023 - nature.com
Refractive index (RI) is considered to be a fundamental physical and biophysical parameter
in biological imaging, as it governs light-matter interactions and light propagation while …
in biological imaging, as it governs light-matter interactions and light propagation while …
Deep learning-based optical field screening for robust optical diffraction tomography
In tomographic reconstruction, the image quality of the reconstructed images can be
significantly degraded by defects in the measured two-dimensional (2D) raw image data …
significantly degraded by defects in the measured two-dimensional (2D) raw image data …
Quantitative 3D refractive index tomography of opaque samples in epi-mode
Three-dimensional (3D) refractive index (RI) tomography has recently become an exciting
new tool for biological studies. However, its limitation to (1) thin samples resulting from a …
new tool for biological studies. However, its limitation to (1) thin samples resulting from a …
ODTbrain: a Python library for full-view, dense diffraction tomography
Background Analyzing the three-dimensional (3D) refractive index distribution of a single
cell makes it possible to describe and characterize its inner structure in a marker-free …
cell makes it possible to describe and characterize its inner structure in a marker-free …
Unlocking the secrets of the invisible world: incredible deep optical imaging through in-silico clearing
In-silico clearing enables deep optical imaging of biological samples by correcting image
blur caused by scattering and aberration. This breakthrough method offers researchers …
blur caused by scattering and aberration. This breakthrough method offers researchers …
[HTML][HTML] Computational approach to dark-field optical diffraction tomography
The measurement of three-dimensional (3D) images and the analysis of subcellular
organelles are crucial for the study of the pathophysiology of cells and tissues. Optical …
organelles are crucial for the study of the pathophysiology of cells and tissues. Optical …
Beyond Born-Rytov limit for super-resolution optical diffraction tomography
Optical diffraction tomography (ODT) using Born or Rytov approximation suffers from severe
distortions in reconstructed refractive index (RI) tomograms when multiple scattering occurs …
distortions in reconstructed refractive index (RI) tomograms when multiple scattering occurs …
Refractive index tomography with structured illumination
To probe biological questions with significant biophysical, biochemical, and molecular
components, an imaging solution compatible with both endogenous and molecular 3D …
components, an imaging solution compatible with both endogenous and molecular 3D …
Optical tissue clearing associated with 3D imaging: application in preclinical and clinical studies
C Brenna, C Simioni, G Varano, I Conti… - Histochemistry and Cell …, 2022 - Springer
Understanding the inner morphology of intact tissues is one of the most competitive
challenges in modern biology. Since the beginning of the twentieth century, optical tissue …
challenges in modern biology. Since the beginning of the twentieth century, optical tissue …
Distortion matrix concept for deep optical imaging in scattering media
In optical imaging, light propagation is affected by the inhomogeneities of the medium.
Sample-induced aberrations and multiple scattering can strongly degrade the image …
Sample-induced aberrations and multiple scattering can strongly degrade the image …