Assessment of helical interfaces in protein–protein interactions

AL Jochim, PS Arora - Molecular BioSystems, 2009 - pubs.rsc.org
Assessment of helical interfaces in protein – protein interactions - Molecular BioSystems (RSC
Publishing) DOI:10.1039/B903202A Royal Society of Chemistry View PDF VersionPrevious …

Anatomy of β-strands at protein–protein interfaces

AM Watkins, PS Arora - ACS chemical biology, 2014 - ACS Publications
The development of inhibitors for protein–protein interactions frequently involves the mimicry
of secondary structure motifs. While helical protein–protein interactions have been heavily …

Systematic analysis of helical protein interfaces reveals targets for synthetic inhibitors

AL Jochim, PS Arora - ACS chemical biology, 2010 - ACS Publications
Synthetic inhibitors of protein− protein interactions are being discovered despite the inherent
challenge in targeting large contact surfaces with small molecules. An analysis of available …

Protein–protein interactions mediated by helical tertiary structure motifs

AM Watkins, MG Wuo, PS Arora - Journal of the American …, 2015 - ACS Publications
The modulation of protein–protein interactions (PPIs) by means of creating or stabilizing
secondary structure conformations is a rapidly growing area of research. Recent success in …

Dual-capped helical interface mimics

T Mi, Z Gao, Z Mituta, K Burgess - Journal of the American …, 2024 - ACS Publications
Disruption of protein–protein interactions is medicinally important. Interface helices may be
mimicked in helical probes featuring enhanced rigidities, binding to protein targets …

Computational design of a new hydrogen bond network and at least a 300-fold specificity switch at a protein− protein interface

LA Joachimiak, T Kortemme, BL Stoddard… - Journal of molecular …, 2006 - Elsevier
The redesign of protein− protein interactions is a stringent test of our understanding of
molecular recognition and specificity. Previously we engineered a modest specificity switch …

End-capped α-helices as modulators of protein function

AB Mahon, PS Arora - Drug Discovery Today: Technologies, 2012 - Elsevier
Examination of complexes of proteins with other biomolecules reveals that proteins tend to
interact with partners via folded subdomains, in which the backbone possesses secondary …

Assessing helical protein interfaces for inhibitor design

BN Bullock, AL Jochim, PS Arora - Journal of the American …, 2011 - ACS Publications
Structure-based design of synthetic inhibitors of protein–protein interactions (PPIs) requires
adept molecular design and synthesis strategies as well as knowledge of targetable …

[HTML][HTML] Flexibility and small pockets at protein–protein interfaces: new insights into druggability

H Jubb, TL Blundell, DB Ascher - Progress in biophysics and molecular …, 2015 - Elsevier
The transient assembly of multiprotein complexes mediates many aspects of cell regulation
and signalling in living organisms. Modulation of the formation of these complexes through …

Rational design of topographical helix mimics as potent inhibitors of protein–protein interactions

BB Lao, K Drew, DA Guarracino… - Journal of the …, 2014 - ACS Publications
Protein–protein interactions encompass large surface areas, but often a handful of key
residues dominate the binding energy landscape. Rationally designed small molecule …