[HTML][HTML] Classification and evolution of human papillomavirus genome variants: Alpha-5 (HPV26, 51, 69, 82), Alpha-6 (HPV30, 53, 56, 66), Alpha-11 (HPV34, 73) …

Z Chen, M Schiffman, R Herrero, R DeSalle, K Anastos… - Virology, 2018 - Elsevier
HPV variants from the same type can be classified into lineages and sublineages based on
the complete genome differences and the phylogenetic topologies. We examined nucleotide …

[HTML][HTML] Human papillomavirus genome variants

RD Burk, A Harari, Z Chen - Virology, 2013 - Elsevier
Amongst the human papillomaviruses (HPVs), the genus Alphapapillomavirus contains HPV
types that are uniquely pathogenic. They can be classified into species and types based on …

Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

Z Chen, M Schiffman, R Herrero, R DeSalle, K Anastos… - PloS one, 2011 - journals.plos.org
Background Human papillomavirus 16 (HPV16) species group (alpha-9) of the
Alphapapillomavirus genus contains HPV16, HPV31, HPV33, HPV35, HPV52, HPV58 and …

Evolution and Taxonomic Classification of Alphapapillomavirus 7 Complete Genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70

Z Chen, M Schiffman, R Herrero, R DeSalle, K Anastos… - PloS one, 2013 - journals.plos.org
Background The species Alphapapillomavirus 7 (alpha-7) contains human papillomavirus
genotypes that account for 15% of invasive cervical cancers and are disproportionately …

[HTML][HTML] Classification and nomenclature system for human Alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and …

RD Burk, Z Chen, A Harari, BC Smith… - … Alpina, Panonica, et …, 2011 - ncbi.nlm.nih.gov
Background Papillomaviruses constitute a family of viruses that can be classified into
genera, species and types based on their viral genome heterogeneity. Currently circulating …

Genome variation of human papillomavirus types: phylogenetic and medical implications

HU Bernard, IE Calleja‐Macias… - International journal of …, 2006 - Wiley Online Library
Human papillomaviruses (HPVs) are described as “types” based on their genome
sequences and identified by a number. For example, HPV‐6 is associated with genital warts …

Papillomavirus subtypes are natural and old taxa: phylogeny of human papillomavirus types 44 and 55 and 68a and-b

IE Calleja-Macias, M Kalantari, B Allan… - Journal of …, 2005 - Am Soc Microbiol
ABSTRACT A human papillomavirus (HPV) type is defined as an HPV isolate whose L1
gene sequence is at least 10% different from that of any other type, while a subtype is 2 to …

Human papillomavirus genomics: past, present and future

A Harari, Z Chen, RD Burk - Human papillomavirus, 2014 - karger.com
Human papillomaviruses (HPV) are a group of divergent DNA viruses, of which a select few
evolutionarily related HPVs have emerged to be highly oncogenic and of significant medical …

[HTML][HTML] Worldwide genomic diversity of the human papillomaviruses-53, 56, and 66, a group of high-risk HPVs unrelated to HPV-16 and HPV-18

JC Prado, IE Calleja-Macias, HU Bernard, M Kalantari… - Virology, 2005 - Elsevier
Among more than 200 human papillomavirus (HPV) types presumed to exist, 18 “high-risk”
HPV types are frequently found in anogenital cancer. The best studied types are HPV-16 …

A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia

M Schiffman, AC Rodriguez, Z Chen, S Wacholder… - Cancer research, 2010 - AACR
Human papillomavirus (HPV) types differ profoundly in cervical carcinogenicity. For the most
carcinogenic type HPV16, variant lineages representing further evolutionary divergence …