[HTML][HTML] Selection of single-nucleotide polymorphisms and quality of genotypes used in genomic evaluation of dairy cattle in the United States and Canada
GR Wiggans, TS Sonstegard, PM VanRaden… - Journal of dairy …, 2009 - Elsevier
Nearly 57,000 single-nucleotide polymorphisms (SNP) genotyped with the Illumina
BovineSNP50 BeadChip (Illumina Inc., San Diego, CA) were investigated to determine …
BovineSNP50 BeadChip (Illumina Inc., San Diego, CA) were investigated to determine …
[HTML][HTML] Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses
Methods for genomic prediction were evaluated for an Israeli Holstein dairy population of
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …
[HTML][HTML] Genomic prediction for Nordic Red Cattle using one-step and selection index blending
This study investigated the accuracy of direct genomic breeding values (DGV) using a
genomic BLUP model, genomic enhanced breeding values (GEBV) using a one-step …
genomic BLUP model, genomic enhanced breeding values (GEBV) using a one-step …
[HTML][HTML] Predictive ability of subsets of single nucleotide polymorphisms with and without parent average in US Holsteins
Genome-enabled prediction of breeding values using high-density panels (HDP) can be
highly accurate, even for young sires. However, the cost of the assay may limit its use to elite …
highly accurate, even for young sires. However, the cost of the assay may limit its use to elite …
[HTML][HTML] Preliminary investigation on reliability of genomic estimated breeding values in the Danish Holstein population
G Su, B Guldbrandtsen, VR Gregersen, MS Lund - Journal of Dairy Science, 2010 - Elsevier
This study investigated the reliability of genomic estimated breeding values (GEBV) in the
Danish Holstein population. The data in the analysis included 3,330 bulls with both …
Danish Holstein population. The data in the analysis included 3,330 bulls with both …
[HTML][HTML] Invited review: The future of selection decisions and breeding programs: What are we breeding for, and who decides?
Genetic selection has been a very successful tool for the long-term improvement of livestock
populations, and the rapid adoption of genomic selection over the last decade has doubled …
populations, and the rapid adoption of genomic selection over the last decade has doubled …
[HTML][HTML] Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information
Currently, genomic evaluations use multiple-step procedures, which are prone to biases and
errors. A single-step procedure may be applicable when genomic predictions can be …
errors. A single-step procedure may be applicable when genomic predictions can be …
[HTML][HTML] Single-step genomic evaluation using multitrait random regression model and test-day data
M Koivula, I Strandén, J Pösö, GP Aamand… - Journal of Dairy …, 2015 - Elsevier
The objectives of this study were to evaluate the feasibility of use of the test-day (TD) single-
step genomic BLUP (ssGBLUP) using phenotypic records of Nordic Red Dairy cows. The …
step genomic BLUP (ssGBLUP) using phenotypic records of Nordic Red Dairy cows. The …
[HTML][HTML] Symposium review: How to implement genomic selection
PM VanRaden - Journal of Dairy Science, 2020 - Elsevier
Genomic selection was adopted very quickly in the 10 yr after first implementation, and
breeders continue to find new uses for genomic testing. Breeding values with higher …
breeders continue to find new uses for genomic testing. Breeding values with higher …
[HTML][HTML] International genomic evaluation methods for dairy cattle
PM VanRaden, PG Sullivan - Genetics Selection Evolution, 2010 - Springer
Background Genomic evaluations are rapidly replacing traditional evaluation systems used
for dairy cattle selection. Higher reliabilities from larger genotype files promote cooperation …
for dairy cattle selection. Higher reliabilities from larger genotype files promote cooperation …