[HTML][HTML] Selection of single-nucleotide polymorphisms and quality of genotypes used in genomic evaluation of dairy cattle in the United States and Canada

GR Wiggans, TS Sonstegard, PM VanRaden… - Journal of dairy …, 2009 - Elsevier
Nearly 57,000 single-nucleotide polymorphisms (SNP) genotyped with the Illumina
BovineSNP50 BeadChip (Illumina Inc., San Diego, CA) were investigated to determine …

[HTML][HTML] Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses

DAL Lourenco, I Misztal, S Tsuruta, I Aguilar… - Journal of dairy …, 2014 - Elsevier
Methods for genomic prediction were evaluated for an Israeli Holstein dairy population of
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …

[HTML][HTML] Genomic prediction for Nordic Red Cattle using one-step and selection index blending

G Su, P Madsen, US Nielsen, EA Mäntysaari… - Journal of dairy …, 2012 - Elsevier
This study investigated the accuracy of direct genomic breeding values (DGV) using a
genomic BLUP model, genomic enhanced breeding values (GEBV) using a one-step …

[HTML][HTML] Predictive ability of subsets of single nucleotide polymorphisms with and without parent average in US Holsteins

AI Vazquez, GJM Rosa, KA Weigel… - Journal of dairy …, 2010 - Elsevier
Genome-enabled prediction of breeding values using high-density panels (HDP) can be
highly accurate, even for young sires. However, the cost of the assay may limit its use to elite …

[HTML][HTML] Preliminary investigation on reliability of genomic estimated breeding values in the Danish Holstein population

G Su, B Guldbrandtsen, VR Gregersen, MS Lund - Journal of Dairy Science, 2010 - Elsevier
This study investigated the reliability of genomic estimated breeding values (GEBV) in the
Danish Holstein population. The data in the analysis included 3,330 bulls with both …

[HTML][HTML] Invited review: The future of selection decisions and breeding programs: What are we breeding for, and who decides?

JB Cole, JW Dürr, EL Nicolazzi - Journal of Dairy Science, 2021 - Elsevier
Genetic selection has been a very successful tool for the long-term improvement of livestock
populations, and the rapid adoption of genomic selection over the last decade has doubled …

[HTML][HTML] Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

I Misztal, A Legarra, I Aguilar - Journal of dairy science, 2009 - Elsevier
Currently, genomic evaluations use multiple-step procedures, which are prone to biases and
errors. A single-step procedure may be applicable when genomic predictions can be …

[HTML][HTML] Single-step genomic evaluation using multitrait random regression model and test-day data

M Koivula, I Strandén, J Pösö, GP Aamand… - Journal of Dairy …, 2015 - Elsevier
The objectives of this study were to evaluate the feasibility of use of the test-day (TD) single-
step genomic BLUP (ssGBLUP) using phenotypic records of Nordic Red Dairy cows. The …

[HTML][HTML] Symposium review: How to implement genomic selection

PM VanRaden - Journal of Dairy Science, 2020 - Elsevier
Genomic selection was adopted very quickly in the 10 yr after first implementation, and
breeders continue to find new uses for genomic testing. Breeding values with higher …

[HTML][HTML] International genomic evaluation methods for dairy cattle

PM VanRaden, PG Sullivan - Genetics Selection Evolution, 2010 - Springer
Background Genomic evaluations are rapidly replacing traditional evaluation systems used
for dairy cattle selection. Higher reliabilities from larger genotype files promote cooperation …