Extensive Genomic Plasticity in Pseudomonas aeruginosa Revealed by Identification and Distribution Studies of Novel Genes among Clinical Isolates

K Shen, S Sayeed, P Antalis, J Gladitz… - Infection and …, 2006 - Am Soc Microbiol
The distributed genome hypothesis (DGH) states that each strain within a bacterial species
receives a unique distribution of genes from a population-based supragenome that is many …

Gene loss and acquisition in lineages of Pseudomonas aeruginosa evolving in cystic fibrosis patient airways

M Gabrielaite, HK Johansen, S Molin, FC Nielsen… - MBio, 2020 - Am Soc Microbiol
Genome analyses have documented that there are differences in gene repertoire between
evolutionary distant lineages of the same bacterial species; however, less is known about …

Dynamics of Pseudomonas aeruginosa genome evolution

K Mathee, G Narasimhan, C Valdes… - Proceedings of the …, 2008 - National Acad Sciences
One of the hallmarks of the Gram-negative bacterium Pseudomonas aeruginosa is its ability
to thrive in diverse environments that includes humans with a variety of debilitating diseases …

Role of horizontal gene transfer in the evolution of Pseudomonas aeruginosa virulence

X Qiu, BR Kulasekara, S Lory - Microbial pathogenomics, 2009 - karger.com
The opportunistic pathogen Pseudomonas aeruginosa causes serious infections in
immunocompromised patients and individuals with cystic fibrosis (CF). It is one of the most …

Parallel Evolution in Pseudomonas aeruginosa over 39,000 Generations In Vivo

HK Huse, T Kwon, JEA Zlosnik, DP Speert… - MBio, 2010 - Am Soc Microbiol
ABSTRACT The Gram-negative bacterium Pseudomonas aeruginosa is a common cause of
chronic airway infections in individuals with the heritable disease cystic fibrosis (CF). After …

Genome evolution drives transcriptomic and phenotypic adaptation in Pseudomonas aeruginosa during 20 years of infection

SJT Wardell, J Gauthier, LW Martin… - Microbial …, 2021 - microbiologyresearch.org
The opportunistic pathogen Pseudomonas aeruginosa chronically infects the lungs of
patients with cystic fibrosis (CF). During infection the bacteria evolve and adapt to the lung …

Evolutionary Genomics of Niche-Specific Adaptation to the Cystic Fibrosis Lung in Pseudomonas aeruginosa

JR Dettman, R Kassen - Molecular biology and evolution, 2021 - academic.oup.com
The comparative genomics of the transition of the opportunistic pathogen Pseudomonas
aeruginosa from a free-living environmental strain to one that causes chronic infection in the …

Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators

RL Marvig, HK Johansen, S Molin, L Jelsbak - PloS genetics, 2013 - journals.plos.org
Genome sequencing of bacterial pathogens has advanced our understanding of their
evolution, epidemiology, and response to antibiotic therapy. However, we still have only a …

Impact of large chromosomal inversions on the adaptation and evolution of Pseudomonas aeruginosa chronically colonizing cystic fibrosis lungs

AU Kresse, SD Dinesh, K Larbig… - Molecular …, 2003 - Wiley Online Library
Pseudomonas aeruginosa chronically colonizing the lungs of cystic fibrosis (CF) patients
undergoes fast evolution leading to clonal divergence. More than half of the genotypes of P …

Polygenic Adaptation and Clonal Interference Enable Sustained Diversity in Experimental Pseudomonas aeruginosa Populations

KB Harris, KM Flynn, VS Cooper - Molecular Biology and …, 2021 - academic.oup.com
How biodiversity arises and can be maintained in asexual microbial populations growing on
a single resource remains unclear. Many models presume that beneficial genotypes will …