Genomics of Adaptation during Experimental Evolution of the Opportunistic Pathogen Pseudomonas aeruginosa

A Wong, N Rodrigue, R Kassen - 2012 - journals.plos.org
Adaptation is likely to be an important determinant of the success of many pathogens, for
example when colonizing a new host species, when challenged by antibiotic treatment, or in …

Genome-Wide Patterns of Recombination in the Opportunistic Human Pathogen Pseudomonas aeruginosa

JR Dettman, N Rodrigue… - Genome biology and …, 2015 - academic.oup.com
The bacterium Pseudomonas aeruginosa is a significant cause of acute nosocomial
infections as well as chronic respiratory infections in patients with cystic fibrosis (CF). Recent …

Evolutionary remodeling of global regulatory networks during long-term bacterial adaptation to human hosts

S Damkiær, L Yang, S Molin… - Proceedings of the …, 2013 - National Acad Sciences
The genetic basis of bacterial adaptation to a natural environment has been investigated in
a highly successful Pseudomonas aeruginosa lineage (DK2) that evolved within the airways …

Evolutionary conservation of essential and highly expressed genes in Pseudomonas aeruginosa

A Dötsch, F Klawonn, M Jarek, M Scharfe, H Blöcker… - BMC genomics, 2010 - Springer
Background The constant increase in development and spread of bacterial resistance to
antibiotics poses a serious threat to human health. New sequencing technologies are now …

Antibiotic resistance in Pseudomonas aeruginosa and adaptation to complex dynamic environments

LM Sommer, HK Johansen, S Molin - Microbial genomics, 2020 - microbiologyresearch.org
Antibiotic resistance has become a serious threat to human health (WHO Antibacterial
Agents in Clinical Development: an Analysis of the Antibacterial Clinical Development …

Pseudomonas aeruginosa Genome Evolution in Patients and under the Hospital Environment

C Lucchetti-Miganeh, D Redelberger, G Chambonnier… - Pathogens, 2014 - mdpi.com
Pseudomonas aeruginosa is a Gram-negative environmental species and an opportunistic
microorganism, establishing itself in vulnerable patients, such as those with cystic fibrosis …

A large-scale whole-genome comparison shows that experimental evolution in response to antibiotics predicts changes in naturally evolved clinical Pseudomonas …

SJT Wardell, A Rehman, LW Martin… - Antimicrobial agents …, 2019 - Am Soc Microbiol
Pseudomonas aeruginosa is an opportunistic pathogen that causes a wide range of acute
and chronic infections. An increasing number of isolates have mutations that make them …

Identification of in vivo essential genes from Pseudomonas aeruginosa by PCR-based signature-tagged mutagenesis

DE Lehoux, F Sanschagrin… - FEMS microbiology …, 2002 - academic.oup.com
We adapted PCR-based signature-tagged mutagenesis (STM) to Pseudomonas
aeruginosa. A collection of 1056 mutants was screened in a chronic lung infection rat model …

Draft genomes of 12 host-adapted and environmental isolates of Pseudomonas aeruginosa and their positions in the core genome phylogeny

L Stewart, A Ford, V Sangal, J Jeukens… - Pathogens and …, 2014 - academic.oup.com
Pseudomonas aeruginosa is a Gram-negative opportunistic pathogen particularly
associated with the inherited disease cystic fibrosis (CF). Pseudomonas aeruginosa is well …

Fitness cost of antibiotic susceptibility during bacterial infection

D Roux, O Danilchanka, T Guillard, V Cattoir… - Science translational …, 2015 - science.org
Advances in high-throughput DNA sequencing allow for a comprehensive analysis of
bacterial genes that contribute to virulence in a specific infectious setting. Such information …