Agent-based modeling in cancer biomedicine: applications and tools for calibration and validation
Computational models are not just appealing because they can simulate and predict the
development of biological phenomena across multiple spatial and temporal scales, but also …
development of biological phenomena across multiple spatial and temporal scales, but also …
Agent-based methods facilitate integrative science in cancer
In this opinion, we highlight agent-based modeling as a key tool for exploration of cell–cell
and cell–environment interactions that drive cancer progression, therapeutic resistance, and …
and cell–environment interactions that drive cancer progression, therapeutic resistance, and …
Integrating quantitative assays with biologically based mathematical modeling for predictive oncology
We provide an overview on the use of biological assays to calibrate and initialize
mechanism-based models of cancer phenomena. Although artificial intelligence methods …
mechanism-based models of cancer phenomena. Although artificial intelligence methods …
Simulating cancer growth with multiscale agent-based modeling
There have been many techniques developed in recent years to in silico model a variety of
cancer behaviors. Agent-based modeling is a specific discrete-based hybrid modeling …
cancer behaviors. Agent-based modeling is a specific discrete-based hybrid modeling …
SMoRe ParS: A novel methodology for bridging modeling modalities and experimental data applied to 3D vascular tumor growth
Multiscale systems biology is having an increasingly powerful impact on our understanding
of the interconnected molecular, cellular, and microenvironmental drivers of tumor growth …
of the interconnected molecular, cellular, and microenvironmental drivers of tumor growth …
Models of models: a translational route for cancer treatment and drug development
LA Ogilvie, A Kovachev, C Wierling, BMH Lange… - Frontiers in …, 2017 - frontiersin.org
Every patient and every disease is different. Each patient therefore requires a personalized
treatment approach. For technical reasons, a personalized approach is feasible for treatment …
treatment approach. For technical reasons, a personalized approach is feasible for treatment …
Advancing cancer drug development with mechanistic mathematical modeling: bridging the gap between theory and practice
Quantitative predictive modeling of cancer growth, progression, and individual response to
therapy is a rapidly growing field. Researchers from mathematical modeling, systems …
therapy is a rapidly growing field. Researchers from mathematical modeling, systems …
High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow
Background Cancer is a complex, multiscale dynamical system, with interactions between
tumor cells and non-cancerous host systems. Therapies act on this combined cancer-host …
tumor cells and non-cancerous host systems. Therapies act on this combined cancer-host …
A review of cell-based computational modeling in cancer biology
Cancer biology involves complex, dynamic interactions between cancer cells and their
tissue microenvironments. Single-cell effects are critical drivers of clinical progression …
tissue microenvironments. Single-cell effects are critical drivers of clinical progression …
Multiscale cancer modeling
Simulating cancer behavior across multiple biological scales in space and time, ie,
multiscale cancer modeling, is increasingly being recognized as a powerful tool to refine …
multiscale cancer modeling, is increasingly being recognized as a powerful tool to refine …