[HTML][HTML] Myeloid cell interferon responses correlate with clearance of SARS-CoV-2

DK Singh, E Aladyeva, S Das, B Singh… - Nature …, 2022 - nature.com
Emergence of mutant SARS-CoV-2 strains associated with an increased risk of COVID-19-
related death necessitates better understanding of the early viral dynamics, host responses …

[HTML][HTML] Meta-analysis of single-cell RNA-seq data reveals phenotypic switching of immune cells in severe COVID-19 patients

MZ Hasan, S Islam, K Matsumoto, T Kawai - Computers in Biology and …, 2021 - Elsevier
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection has resulted in
the global coronavirus disease 2019 (COVID-19) pandemic. Despite several single-cell …

[HTML][HTML] People critically ill with COVID-19 exhibit peripheral immune profiles predictive of mortality and reflective of SARS-CoV-2 lung viral burden

AR Cillo, A Somasundaram, F Shan, C Cardello… - Cell Reports …, 2021 - cell.com
Despite extensive analyses, there remains an urgent need to delineate immune cell states
that contribute to mortality in people critically ill with COVID-19. Here, we present high …

[HTML][HTML] Transcriptomic similarities and differences in host response between SARS-CoV-2 and other viral infections

SA Thair, YD He, Y Hasin-Brumshtein, S Sakaram… - Iscience, 2021 - cell.com
The pandemic 2019 novel coronavirus disease (COVID-19) shares certain clinical
characteristics with other acute viral infections. We studied the whole-blood transcriptomic …

[HTML][HTML] A single-cell atlas of the peripheral immune response in patients with severe COVID-19

AJ Wilk, A Rustagi, NQ Zhao, J Roque… - Nature medicine, 2020 - nature.com
There is an urgent need to better understand the pathophysiology of Coronavirus disease
2019 (COVID-19), the global pandemic caused by SARS-CoV-2, which has infected more …

[HTML][HTML] Delineating COVID-19 immunological features using single-cell RNA sequencing

W Liu, J Jia, Y Dai, W Chen, G Pei, Q Yan, Z Zhao - The Innovation, 2022 - cell.com
Understanding the molecular mechanisms of coronavirus disease 2019 (COVID-19)
pathogenesis and immune response is vital for developing therapies. Single-cell RNA …

Bulk and single-cell gene expression profiling of SARS-CoV-2 infected human cell lines identifies molecular targets for therapeutic intervention

W Emanuel, M Kirstin, F Vedran, D Asija, GL Theresa… - BioRxiv, 2020 - biorxiv.org
Abstract The coronavirus disease 2019 (COVID-19) pandemic, caused by the novel severe
acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is an ongoing global health threat …

Human SARS-CoV-2 challenge resolves local and systemic response dynamics

RGH Lindeboom, KB Worlock, LM Dratva, M Yoshida… - MedRxiv, 2023 - medrxiv.org
The COVID-19 pandemic is an ongoing global health threat, yet our understanding of the
cellular disease dynamics remains limited. In our unique COVID-19 human challenge study …

[HTML][HTML] A blood transcriptome-based analysis of disease progression, immune regulation, and symptoms in coronavirus-infected patients

A Sadanandam, T Bopp, S Dixit, DJHF Knapp… - Cell death …, 2020 - nature.com
COVID-19 patients show heterogeneity in clinical presentation and outcomes that makes
pandemic control and strategy difficult; optimizing management requires a systems biology …

The cellular immune response to COVID-19 deciphered by single cell multi-omics across three UK centres

E Stephenson, G Reynolds, RA Botting… - MedRxiv, 2021 - medrxiv.org
The COVID-19 pandemic, caused by SARS coronavirus 2 (SARS-CoV-2), has resulted in
excess morbidity and mortality as well as economic decline. To characterise the systemic …