A roadmap for natural product discovery based on large-scale genomics and metabolomics
Actinobacteria encode a wealth of natural product biosynthetic gene clusters, whose
systematic study is complicated by numerous repetitive motifs. By combining several metrics …
systematic study is complicated by numerous repetitive motifs. By combining several metrics …
Integrated metabolomic–genomic workflows accelerate microbial natural product discovery
The pairing of analytical chemistry with genomic techniques represents a new wave in
natural product chemistry. With an increase in the availability of sequencing and assembly of …
natural product chemistry. With an increase in the availability of sequencing and assembly of …
Genomic basis for natural product biosynthetic diversity in the actinomycetes
M Nett, H Ikeda, BS Moore - Natural product reports, 2009 - pubs.rsc.org
Covering: up to mid-2009 The phylum Actinobacteria hosts diverse high G+ C, Gram-
positive bacteria that have evolved a complex chemical language of natural product …
positive bacteria that have evolved a complex chemical language of natural product …
Ecology and genomics of Actinobacteria: new concepts for natural product discovery
Actinobacteria constitute a highly diverse bacterial phylum with an unrivalled metabolic
versatility. They produce most of the clinically used antibiotics and a plethora of other natural …
versatility. They produce most of the clinically used antibiotics and a plethora of other natural …
Cryptic or silent? The known unknowns, unknown knowns, and unknown unknowns of secondary metabolism
PA Hoskisson, RF Seipke - MBio, 2020 - Am Soc Microbiol
Microbial natural products, particularly those produced by filamentous Actinobacteria,
underpin the majority of clinically used antibiotics. Unfortunately, only a few new antibiotic …
underpin the majority of clinically used antibiotics. Unfortunately, only a few new antibiotic …
Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes
Bacterial specialized metabolites are a proven source of antibiotics and cancer therapies,
but whether we have sampled all the secondary metabolite chemical diversity of cultivated …
but whether we have sampled all the secondary metabolite chemical diversity of cultivated …
[HTML][HTML] Activation of microbial secondary metabolic pathways: Avenues and challenges
B Baral, A Akhgari, M Metsä-Ketelä - Synthetic and Systems Biotechnology, 2018 - Elsevier
Microbial natural products are a tremendous source of new bioactive chemical entities for
drug discovery. Next generation sequencing has revealed an unprecedented genomic …
drug discovery. Next generation sequencing has revealed an unprecedented genomic …
Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
Covering: 2000 to 2016 The labor-intensive process of microbial natural product discovery is
contingent upon identifying discrete secondary metabolites of interest within complex …
contingent upon identifying discrete secondary metabolites of interest within complex …
Strategies to access biosynthetic novelty in bacterial genomes for drug discovery
F Hemmerling, J Piel - Nature Reviews Drug Discovery, 2022 - nature.com
Bacteria provide a rich source of natural products with potential therapeutic applications,
such as novel antibiotic classes or anticancer drugs. Bioactivity-guided screening of …
such as novel antibiotic classes or anticancer drugs. Bioactivity-guided screening of …
Identification of thiotetronic acid antibiotic biosynthetic pathways by target-directed genome mining
Recent genome sequencing efforts have led to the rapid accumulation of uncharacterized or
“orphaned” secondary metabolic biosynthesis gene clusters (BGCs) in public databases …
“orphaned” secondary metabolic biosynthesis gene clusters (BGCs) in public databases …