Deep learning-based transcriptome data classification for drug-target interaction prediction

L Xie, S He, X Song, X Bo, Z Zhang - BMC genomics, 2018 - Springer
Background The ability to predict the interaction of drugs with target proteins is essential to
research and development of drug. However, the traditional experimental paradigm is costly …

Deep learning in drug target interaction prediction: current and future perspectives

K Abbasi, P Razzaghi, A Poso… - Current Medicinal …, 2021 - ingentaconnect.com
Drug-target Interactions (DTIs) prediction plays a central role in drug discovery.
Computational methods in DTIs prediction have gained more attention because carrying out …

Machine learning for drug-target interaction prediction

R Chen, X Liu, S Jin, J Lin, J Liu - Molecules, 2018 - mdpi.com
Identifying drug-target interactions will greatly narrow down the scope of search of candidate
medications, and thus can serve as the vital first step in drug discovery. Considering that in …

DeepPurpose: a deep learning library for drug–target interaction prediction

K Huang, T Fu, LM Glass, M Zitnik, C Xiao… - Bioinformatics, 2020 - academic.oup.com
Accurate prediction of drug–target interactions (DTI) is crucial for drug discovery. Recently,
deep learning (DL) models for show promising performance for DTI prediction. However …

Padme: A deep learning-based framework for drug-target interaction prediction

Q Feng, E Dueva, A Cherkasov, M Ester - arXiv preprint arXiv:1807.09741, 2018 - arxiv.org
In silico drug-target interaction (DTI) prediction is an important and challenging problem in
biomedical research with a huge potential benefit to the pharmaceutical industry and …

Revealing drug-target interactions with computational models and algorithms

L Zhou, Z Li, J Yang, G Tian, F Liu, H Wen, L Peng… - Molecules, 2019 - mdpi.com
Background: Identifying possible drug-target interactions (DTIs) has become an important
task in drug research and development. Although high-throughput screening is becoming …

Novel deep learning-based transcriptome data analysis for drug-drug interaction prediction with an application in diabetes

Q Luo, S Mo, Y Xue, X Zhang, Y Gu, L Wu, J Zhang… - BMC …, 2021 - Springer
Background Drug-drug interaction (DDI) is a serious public health issue. The L1000
database of the LINCS project has collected millions of genome-wide expressions induced …

HIDTI: integration of heterogeneous information to predict drug-target interactions

J Soh, S Park, H Lee - Scientific reports, 2022 - nature.com
Identification of drug-target interactions (DTIs) plays a crucial role in drug development.
Traditional laboratory-based DTI discovery is generally costly and time-consuming …

Open-source chemogenomic data-driven algorithms for predicting drug–target interactions

M Hao, SH Bryant, Y Wang - Briefings in bioinformatics, 2019 - academic.oup.com
While novel technologies such as high-throughput screening have advanced together with
significant investment by pharmaceutical companies during the past decades, the success …

Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data

W Zhang, Y Chen, F Liu, F Luo, G Tian, X Li - BMC bioinformatics, 2017 - Springer
Abstract Background Drug-drug interactions (DDIs) are one of the major concerns in drug
discovery. Accurate prediction of potential DDIs can help to reduce unexpected interactions …